Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02771 ATGGCCTTACAGAACATTGGTGCTGGCAACAGTGATGATGCCTTCTACAGGTATAAAATGCCTAGAATGATTACCAAAATTGAGGGCAGAGGCAATGGCATCAAAACGAATATTGTCAATATGGTTGATATTGCAAAAGCTTTAGCAAGGCCAGCTGCTTACACGACAAAGTATTTTGGTTGTGAACTTGGAGCACAGTCAAAATTTGATGAGAAAACCGGGACTTCTCATGTCAACGGATCACACGACACTGCAAAACTTGCTGGTCTACTTGAGAACTTCATTAAGAAATATGTCCAGTGTTATGGTTGTGGAAATCCTGAAACTGAGATCATAATTACCAAGAATCAAATGATCCAGATGAAATGCGCTGCTTGTGGTTTTGTATCTGACGTGGATATGAGAGACAAGCTTACTACTTTCATCATTAAGAACCCACCAGAAACAAAGAAAGGTTCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAGAGACTGAAGGCAGGCGAAGCAGCTGATGAGGAGCTGAAAAAGCTGAAGAAAGAGGTCGTCAAGAAGAAAGTAACTTCTAAGGAAGGCACCACAAAATCAAGCTCTTCAAGGAAGAAAGAAAATGGCTCTGATGAAGATCATACTTCTCCTACTCGAAGTCCAAATGATGAGAAGGACGACGATGTAGATGAAGATGATGTACAATGGCAAACAGACACATCATTGGAGGCTGCTCGTCAACGAATCCAAGAACAGTTAAGTGCTGTGACAGCTGATATGGTCATGCTCTCCACAACTGAACCTGAACCAGAGAAGGAGAAACCAGCCACTAATGGTAACTCCATGAACTACAAGAATCTTGTTGGTGAACTCAAAGCTGATTTGAAGAAAGGTGTTTCGGCCAAAGAATTGGTGACCCATTGGGCATCACTTCCTGTCTCTCCACAAGAAAAGATGAGTGCTCTGTATGAAGCCCTATTTGGGGACATTGAGAAAGGGTTTGCAAAAGAAGTACTCAAGAAGAAGAACTACCTTGCTGCTGCAGTTGCTGAGGAAGAGGGTATGTCGTTGCTGTTGCTGCGCGCAATTGAGGAATTTTCTTTGATGTCCACTTCCTCTGCACTTAAGGAGGTTGCTCTGGTTCTGAAGGCACTCTACGATGCAGATGCGTTGGAGGAAGAACACATATTGCAGTGGTATCAAGAAGGGCTGAAAAGCGATAACAAGAACTCTCAGGTTTGGAAGAACGTTAAACCTTTCATTGAGTGGCTTCAGAGTGCAGAATCAGAGTCCGAGGAAGAGTAA 1299 0.4326 MALQNIGAGNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPAAYTTKYFGCELGAQSKFDEKTGTSHVNGSHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQMKCAACGFVSDVDMRDKLTTFIIKNPPETKKGSKDKKAMRRAEKERLKAGEAADEELKKLKKEVVKKKVTSKEGTTKSSSSRKKENGSDEDHTSPTRSPNDEKDDDVDEDDVQWQTDTSLEAARQRIQEQLSAVTADMVMLSTTEPEPEKEKPATNGNSMNYKNLVGELKADLKKGVSAKELVTHWASLPVSPQEKMSALYEALFGDIEKGFAKEVLKKKNYLAAAVAEEEGMSLLLLRAIEEFSLMSTSSALKEVALVLKALYDADALEEEHILQWYQEGLKSDNKNSQVWKNVKPFIEWLQSAESESEEE 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02771 432 ProSiteProfiles W2 domain profile. 272 432 IPR003307 GO:0005515
Tsu07g02771 432 CDD W2_eIF5 281 425 - -
Tsu07g02771 432 Gene3D - 268 423 - -
Tsu07g02771 432 MobiDBLite consensus disorder prediction 185 233 - -
Tsu07g02771 432 Pfam eIF4-gamma/eIF5/eIF2-epsilon 357 432 IPR003307 GO:0005515
Tsu07g02771 432 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 432 IPR045196 GO:0003743|GO:0006413
Tsu07g02771 432 SMART 542_3 340 428 IPR003307 GO:0005515
Tsu07g02771 432 Gene3D - 3 104 - -
Tsu07g02771 432 MobiDBLite consensus disorder prediction 185 222 - -
Tsu07g02771 432 MobiDBLite consensus disorder prediction 148 170 - -
Tsu07g02771 432 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 1 432 - -
Tsu07g02771 432 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Tsu07g02771 432 MobiDBLite consensus disorder prediction 143 170 - -
Tsu07g02771 432 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Tsu07g02771 432 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Tsu07g02771 432 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Tsu07g02771 432 Gene3D - 105 145 - -
Tsu07g02771 432 SUPERFAMILY ARM repeat 281 426 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02771 Tsu-Chr7 32508452 32509750 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02771 1 425 Eukaryotic Initiation Factors Gene Family AT1G36730 65.011 4.31e-180 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02771 K03262 - gmx:100778073 625.165