Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02757 ATGTTTGCAAATGGAGAACAGTTACTGGGTTTTCCTCTCCGCCAAAGACGAAAGTATCTGAAGGATTTGTTCTATGATGAACGGCCTGGGTATTTTgaatatgcaaaagaaacaaCTATCGAAGCAGATGATGCTTGCTTAACATGTGAAGCCACATTAACTAGAATAAATACTTTCCTTGAAGATGCACTCCGCTCTTCATGTGAAGGAATTATGGTGAAATCGTTGGATATTGATTATGGGTATTCCCCATCGAAGCGTTCTGACAAATGGTTAAAGGTCAAGCGAGATTATGTGGAAGGATTAAATGATACTCTTGATTTAGTACCAATTGGTGCTTGGCATGGAAATGGAAGGAAAGCTGGATAG 369 0.3794 MFANGEQLLGFPLRQRRKYLKDLFYDERPGYFEYAKETTIEADDACLTCEATLTRINTFLEDALRSSCEGIMVKSLDIDYGYSPSKRSDKWLKVKRDYVEGLNDTLDLVPIGAWHGNGRKAG 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02757 122 PANTHER DNA LIGASE 3 1 122 - -
Tsu07g02757 122 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 1 122 - -
Tsu07g02757 122 Gene3D DNA ligase/mRNA capping enzyme 1 35 - -
Tsu07g02757 122 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 1 96 - -
Tsu07g02757 122 Pfam ATP dependent DNA ligase domain 2 95 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Tsu07g02757 122 Gene3D - 36 99 - -
Tsu07g02757 122 Gene3D - 100 122 IPR012340 -
Tsu07g02757 122 ProSiteProfiles ATP-dependent DNA ligase family profile. 1 122 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02757 Tsu-Chr7 32374295 32375484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02757 1 122 Core DNA Replication Machinery Family AT1G08130 40.164 2.35e-27 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02757 - - gmx:100807673 243.432