Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02746 ATGAGCTTCATCGATGACGGCATCGACTTAGACCCTTCCGATTTCGGCTCATCAGTTCCTCTTAAAAAAGTCCCAAACGGCGACGTTTTCCAAGCATCACGCGCCGGCGACGTCGACCGTCTCCGTTACCTTCTTGAATGCGGCGTTAACGTCAACGCTCGTGATCAATGGGACTCCGTCGCACTTTACTACGCTTGTCTCTCCGGTCATCTTGATGCCGCTCGTATGCTTCTAGAAAGTGGGGCTATTTGCTCCGAACACACTTTTGACGGTGATCGTTGTCATTACGCTGCTCTCAATTTGAAGGTTCGGAAACTTCTTAAAGCTTTTGAAGCTCGTCCTCCTCCTTTGAATCCTTTGCAGTCTTCTCTCCGTGATACTTTTTTTGCTTGTCCTGCTAATTCGCATTCCGGTGGCTTTCAGTTACCTGGCATCTCGTCCACTCAAGGGTTCAGTTGCAACTACTTTCCTCCAGATGTGGTTTTTACTGTACAAGGAAGACCCATTGAAGCTCACAGGGTCATATTAAGTGCAAGGTCGCcatttttcaagaaaaagttTGAAACTGATTGGAAAGAGCGCAGTGAAGTAAGATTTTCCCGGGAAAAGTTGTCATATCCTGCACTTTATAGCCTTATACATTTCTTTTATTCAGACAGATTAGAGATTGCTGTGGATGACATGGAGGATATTGTGAGAATTTGCAAAGTATGCAAATGTGAATCTCTACAGAAAATTCTCGAGAAAGAAGTAGTTCATCAAAAATATGCAGATTATAAAGCTTTGACAGATGTAGACAACTCCCAGAAGCGGTTTATTTTACAGGGTCAATCTCTTCCTGAAGAAGACAGGCTTCCTGCAGCCTTGCACAGAATCCTTCTGACGTCCCTTTCAAATTCCACTCATGAAAATTGTCAAGATAATGGAATCGATGAATTGGTATTTAGGATGGATGCCATGCAGATGGCTAAACCTCTAAATGATCTTTCTGATGTTTGCGTAAGAGTTGATAGAAAAAATTTCCGCTGCCATAAAATTATTCTAGCATCAAGGTCAGAATATTTCAAAGCAAGACTATCACGTATGCAGGATTTCCATGAAGGGaaagataaattttatgttGACTTCCTTCCTTGTCTTGAAGAACATGACATTAGTGTGGAAGCATTTGAGAAAATGATTGAATATATGTACACAGACCGTTTGCAGGAAATAAATCCAGATCAGGCTGAGGAAATGTTTGATATTGCTTCTAGATACTTGATGTTTCCTCTTAAGCGTGCGGTGGCTGATGTTCTAATACCACACTTGGAAGTGGCGTCACCTGAGGAGCTTTGCTATTGGTTAATGCTAGCGGAcatGTATGGTGTTTTGAAGATCCGGGAATTCTGTTTAGACACCATTGCCTGTAATTTTGAAATGTTTGCCGATACTAAAGATTTTCGGGCATTGTTGTTGACTTTGCCTCCACCATCTGGAGACTCGTCTCTTCGTACCACTGTCCCAAGCATGCCTGGATCTGCCCTAAATAATGATCAAGGAAATCTTCTTGATGATTTACGTGATAAATGGCTCGAGATTGAAGCTGCTGAGCTTGACGAGAGAGATGAGAGTGCTTTACAATTTGACAAGCGCCTAGAGATGCTTATGGTTGTTGCAGAGCATGAAAAGTCATCAGGTGATGCTGATTCAAATGGTATTAATGATGTCAAACACTTGGCTTTCTCCCCAATCACACCTTTAATTTCAGGTGAACAAAAAGAACCATAG 1770 0.4164 MSFIDDGIDLDPSDFGSSVPLKKVPNGDVFQASRAGDVDRLRYLLECGVNVNARDQWDSVALYYACLSGHLDAARMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLNPLQSSLRDTFFACPANSHSGGFQLPGISSTQGFSCNYFPPDVVFTVQGRPIEAHRVILSARSPFFKKKFETDWKERSEVRFSREKLSYPALYSLIHFFYSDRLEIAVDDMEDIVRICKVCKCESLQKILEKEVVHQKYADYKALTDVDNSQKRFILQGQSLPEEDRLPAALHRILLTSLSNSTHENCQDNGIDELVFRMDAMQMAKPLNDLSDVCVRVDRKNFRCHKIILASRSEYFKARLSRMQDFHEGKDKFYVDFLPCLEEHDISVEAFEKMIEYMYTDRLQEINPDQAEEMFDIASRYLMFPLKRAVADVLIPHLEVASPEELCYWLMLADMYGVLKIREFCLDTIACNFEMFADTKDFRALLLTLPPPSGDSSLRTTVPSMPGSALNNDQGNLLDDLRDKWLEIEAAELDERDESALQFDKRLEMLMVVAEHEKSSGDADSNGINDVKHLAFSPITPLISGEQKEP 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02746 589 Pfam BTB/POZ domain 156 254 IPR000210 GO:0005515
Tsu07g02746 589 Pfam BTB/POZ domain 328 434 IPR000210 GO:0005515
Tsu07g02746 589 Gene3D Potassium Channel Kv1.1; Chain A 149 273 IPR011333 -
Tsu07g02746 589 Gene3D Potassium Channel Kv1.1; Chain A 314 469 IPR011333 -
Tsu07g02746 589 CDD BACK 441 484 - -
Tsu07g02746 589 Pfam Ankyrin repeats (many copies) 30 78 IPR002110 GO:0005515
Tsu07g02746 589 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 7 553 IPR044515 -
Tsu07g02746 589 SMART BTB_4 330 437 IPR000210 GO:0005515
Tsu07g02746 589 SMART BTB_4 158 255 IPR000210 GO:0005515
Tsu07g02746 589 SUPERFAMILY Ankyrin repeat 31 108 IPR036770 -
Tsu07g02746 589 ProSiteProfiles BTB domain profile. 158 225 IPR000210 GO:0005515
Tsu07g02746 589 ProSiteProfiles BTB domain profile. 330 406 IPR000210 GO:0005515
Tsu07g02746 589 Gene3D - 29 114 IPR036770 -
Tsu07g02746 589 SUPERFAMILY POZ domain 326 436 IPR011333 -
Tsu07g02746 589 SUPERFAMILY POZ domain 152 249 IPR011333 -
Tsu07g02746 589 CDD BTB_POZ_ZBTB_KLHL-like 329 420 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Tsu07g02746 BTB 3.2e-17 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02746 K10520 - gmx:100812009 912.909