Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02742 ATGGAAGCAAAGAAAGAGGAGGCACTTAAAGCGATAGCGAATGCTGAGAAAAGATTTGCTCATAGAGACTTTGTTGGAGCAAAAAGTTATGCTTTAAAAGCCAAAACACTGTGTCCTGGATTGGAGGGTATATCTCAATTGGTGACCACTTTTGAAGTTTACATTGCCTCTCAAGTTACCTGCAATGGTGAACTAGATTGGTATTCTATTATGGGTTTAAAACCTTCGTCAAATATAGAAGCTGTGAAGAAACGGTACAAGAAGATGGCTGGGTTGCTCCACCCTGATAATAACAAGTGTGTCGGAGCTGATGGGGCATTTCATCTTGTTTCTGAGGCATGGAGTAGGCTGTCTGGTAGTTATGATCTGAAGAGAAATGCACATTCGGGTGCTGGGCATGGACTTCATCACAAAGGTTTGTCTTCGGTTCATGCCTCTGGTGGTAATCAGGATACTTTCTGGACGATTTGTACTTCTTGCAAAGTTCAGTATGAGTATCTGCGCAAGTATATAAATAAGAAACTTTCTTGTAAGAATTGCCGTGGGGTTTTCATTGCTGTTGAAACAGCCCCGGCAAATGGCTCATTCCCGTATTGTCCTTGGTCTTATGGGTCTAGCAGTGGTTATGGAAGCCATTCATATGATGGTGTTACATATGTTCCCACTAATGGTGCCTATTTCAATGGTAATGGAGTCGCCGGATACCATTCTGCACACGGGTATGCTTCAAATGTTCCTTATCAAATTAGCTCTGCTGGATATGTCAATCAAAATGGATCAACTGCCTTACCTGCTTCTCAGGCCAATGGGCATGCAAAGAGGGGAAGACCAAAAGTTAAATCAGGAGCGGATAGGAAGCATTGCATGACAGAGACAGTGGTCAATATAAATTCAGATGTATCATTCTCCCGGAATGAACCACAGGAGGTTAAGCCGAGTAGACCTGAGAAGAAAAGGAAAGTTCTAGGAGCCAGTTTAAGAGATGTCCATGAAGGAAAGGGTTTAAATTGTGCTTCAGAGTCAGGATTGGTTAATGGGAATGGAAGTGTTGGGCATGGCCAGAGGCTTTCCTGTACAAGTGAAGTTCCAACCAAACAGTATGCCAAACAGTATTCCATGGCACCAGCTTTTGATGCAAGAAAATTATTGATTGAGAAAGCCAGGACAGAAATTAGGAAAAAACTGGAAGAGATGAAGTTGGCATCTGAAACTGCAGCTGCTAttaatgagagaaaaaaatctCAAGCTGATGATGGTCAGGTCAAAGGAGACACGCACATTAAAACAGTTCTGAACATTTCTGACAATCAGTTAGAACTTAGGAAAACTGTTCCAGTTACAATTACTGTCCCAGATCCTGACTTTCATGACTTTGACAAAGATAGGTCAGAGCCGTGCTTCAAGCCAAAGCAAATATGGGCCTTGTATGATGAGGAAGATGGGATGCCCCGCTTGTATTGTCTGATACGCGAGGTTGTGTCTGTTAATCCATTCAAGATTAACATTAGTTACTTGAGTTCAAAAACTGATAGCGAGTTTGGCCAAGTGAACTGGCTTGTTTCAGGTTTCACAAAATCTTGTGGAAATTTCAGGGCCATGACCTCTGATGTTGTTGACCAAGTTAACATTTTTTCTCATGCTCTAAGCAGGGTGAAGGCCGGTCGAGGCGGTTGTGTTCGCATATATCCCAAATGTGGAGAAATTTGGGCTGTTTACAGAAACTGGTCAACAGATTGGAACAGATCTACACCAGATGAAGTAAGGCATCAGTACGATATGGTGGAGGTGCTAGATGATTATTCTGAGGAGCTTGGTCTTTGCATTAGCCCCCTTATCAAGTTGGATGGATTCAAAACCGTGTACAAGAGGAACACAGACAAAAGTGCCATTAGATGGATTCCAAGAAGAGAAATGTTGCGCTTTTCGCACCAAGTGCCTTCGTGGTTGTTGAAGGGGGAGGAGGCAAGCAATTTGCCTGACAAGTGTTGGGACCTTGATCCAGCTGCAACTCCTGACGAGCTCCTTCATACTGCTATAGAAGCAACAAATGCTTCGTAG 2058 0.4276 MEAKKEEALKAIANAEKRFAHRDFVGAKSYALKAKTLCPGLEGISQLVTTFEVYIASQVTCNGELDWYSIMGLKPSSNIEAVKKRYKKMAGLLHPDNNKCVGADGAFHLVSEAWSRLSGSYDLKRNAHSGAGHGLHHKGLSSVHASGGNQDTFWTICTSCKVQYEYLRKYINKKLSCKNCRGVFIAVETAPANGSFPYCPWSYGSSSGYGSHSYDGVTYVPTNGAYFNGNGVAGYHSAHGYASNVPYQISSAGYVNQNGSTALPASQANGHAKRGRPKVKSGADRKHCMTETVVNINSDVSFSRNEPQEVKPSRPEKKRKVLGASLRDVHEGKGLNCASESGLVNGNGSVGHGQRLSCTSEVPTKQYAKQYSMAPAFDARKLLIEKARTEIRKKLEEMKLASETAAAINERKKSQADDGQVKGDTHIKTVLNISDNQLELRKTVPVTITVPDPDFHDFDKDRSEPCFKPKQIWALYDEEDGMPRLYCLIREVVSVNPFKINISYLSSKTDSEFGQVNWLVSGFTKSCGNFRAMTSDVVDQVNIFSHALSRVKAGRGGCVRIYPKCGEIWAVYRNWSTDWNRSTPDEVRHQYDMVEVLDDYSEELGLCISPLIKLDGFKTVYKRNTDKSAIRWIPRREMLRFSHQVPSWLLKGEEASNLPDKCWDLDPAATPDELLHTAIEATNAS 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02742 685 MobiDBLite consensus disorder prediction 300 320 - -
Tsu07g02742 685 ProSiteProfiles dnaJ domain profile. 66 132 IPR001623 -
Tsu07g02742 685 PRINTS DnaJ domain signature 68 86 IPR001623 -
Tsu07g02742 685 PRINTS DnaJ domain signature 86 101 IPR001623 -
Tsu07g02742 685 PRINTS DnaJ domain signature 102 122 IPR001623 -
Tsu07g02742 685 CDD DnaJ 66 118 IPR001623 -
Tsu07g02742 685 PANTHER BNAC03G44070D PROTEIN 1 678 - -
Tsu07g02742 685 Pfam DnaJ domain 66 118 IPR001623 -
Tsu07g02742 685 Pfam Domain of unknown function (DUF3444) 447 654 IPR024593 -
Tsu07g02742 685 SUPERFAMILY Chaperone J-domain 56 120 IPR036869 -
Tsu07g02742 685 SMART dnaj_3 65 122 IPR001623 -
Tsu07g02742 685 PANTHER BNAC03G44070D PROTEIN 1 678 - -
Tsu07g02742 685 MobiDBLite consensus disorder prediction 264 285 - -
Tsu07g02742 685 Coils Coil 384 404 - -
Tsu07g02742 685 Gene3D DnaJ domain 54 122 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02742 Tsu-Chr7 32141354 32144625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02742 5 240 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 27.969 2.99e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02742 - - gmx:100792639 995.727