Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02741 ATGGGTCGTTGCCGAACCGCTTCACGCTCCGCCGATGATGACCCCAACCACagATCCAAGAGAAAAAGGGCTGCTATAAATGCTGAGAATTTAGAAACTTCATCGGCAGGCACGGGAGTAACCGATGGCAAGGTATCACTATATCACTGTAATTACTGCAACAAAGATATTTCAGGGAAGATTCGCATCAAATGTGTTGTGTGTCAAGATTTTGATCTCTGCATAGAGTGCTTCTCTGTTGGTGCTGAGTTGACACCTCATAAAAGCAATCATCCATATCGAGTTATGGATAATCTATCTTTTCCGCTTATATGTCCAGATTGGAGTGCAGATGAAGAGATGTTACTTCTTGAGGCCATTGACATGTATGGATTTGGAAATTGGAATGATGTTGCTgacaatgttggaacaaaaagcAAATCTCAGTGTATTGACCACTATAATGCTGTATATCTGAATTCACCATGTTTTCCTGTACCTGATTTGTCTCTTGTGAAGGGAAAGAACAAAGAGGAACTTCTTGCCATGGCAAAGGGACATCAAGTCAAGAAAGAATTTCCTCCAAATGCAGAGCTGCCTCTGAAAGAAGAAACTCTTTTCTCTGATGGAATAAACTCTGAAGAATCTAAGAAAGAAGAAACCTCTAATCAAGCAATGTCCAGGCTAACTTCAGCATGCGGTAAAAAAGCTGTTTCAAGTACAATCAAGAAGGCTTCCAATGTGAGCCAGAATGTTGATGGAGTTAAGGTGGAAGAATCTCAAGCAGGTCGGAGCATTGGTGAAAAGAAACCTAAATTATCTGGGGAATATAGGCCTTCTATGAAAGCGTTGAGTGGGTACAATTCTAAGAGAGGTGAATTCGAAATTGAATATGACAATGATGCTGAGCAAGTTTTAGCAGAAATGGAATTTAAGGACACTGATACTGAAGCTGAACGTGAAGCAAAACTGCAAGTGCTCCGTATCTATGGAAAAAGGTTAGATGAACGAAAGTacagaaaaaaatttatacttgAAAGAAATTTACTTTCTCCTGATCCTTTTGAGAAATCTCTCTCACCCGAAGAGCTTGAAATATGTCAACGGTACAAGGTCTTCATGCGATTTCACTCAAAAGAAGAGCATGAGGAGTTGCTAAAAACTATTATTGAAGAACACCGGCTTCTCAAAAGAATAAAAGACTTACAGGAAGCTCGGATTGCTGGCTGTGTAACTGCTGCTGATGCATATCATTTTGTTGAACAAAAGAGGGCAAATGAAGCTGAACAAGGTGACAATAAAGATAGTGGTCAGATTGGAACAAGTGGTAAGACTTCACAGAGGCCAAATTTTCCCAAAGTAGAGCTTGGTAGTAGCCCACGCGGGATCCATAAGGGCACTGCAGCATCATTTCCTGGTATCAAGGATGCACCGGGGGCCATACAAGCCATCACAAGGTCGCTAGAAGAATGGGACATCAGTGATTTTGACGGGGCTGAATTACTATCTGAATCGGAGATAAAGCTTTGTAACGAGAACAGATTACTACCGACACACTACCTCTACATAAGTCAGACCATGCAGTTCGAAATTTCAAAGGGCAATGTAACCAAGAAATCTGATGCATATCCACTGTTCAAATTCTCTCCAAGCAAGATTGATAGAATTTATGACATGCTTGTGGAAAAAGGAGTTGTGCAACCTCAAGCATAA 1692 0.4007 MGRCRTASRSADDDPNHRSKRKRAAINAENLETSSAGTGVTDGKVSLYHCNYCNKDISGKIRIKCVVCQDFDLCIECFSVGAELTPHKSNHPYRVMDNLSFPLICPDWSADEEMLLLEAIDMYGFGNWNDVADNVGTKSKSQCIDHYNAVYLNSPCFPVPDLSLVKGKNKEELLAMAKGHQVKKEFPPNAELPLKEETLFSDGINSEESKKEETSNQAMSRLTSACGKKAVSSTIKKASNVSQNVDGVKVEESQAGRSIGEKKPKLSGEYRPSMKALSGYNSKRGEFEIEYDNDAEQVLAEMEFKDTDTEAEREAKLQVLRIYGKRLDERKYRKKFILERNLLSPDPFEKSLSPEELEICQRYKVFMRFHSKEEHEELLKTIIEEHRLLKRIKDLQEARIAGCVTAADAYHFVEQKRANEAEQGDNKDSGQIGTSGKTSQRPNFPKVELGSSPRGIHKGTAASFPGIKDAPGAIQAITRSLEEWDISDFDGAELLSESEIKLCNENRLLPTHYLYISQTMQFEISKGNVTKKSDAYPLFKFSPSKIDRIYDMLVEKGVVQPQA 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02741 563 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Tsu07g02741 563 CDD SANT 108 148 IPR001005 -
Tsu07g02741 563 SUPERFAMILY Homeodomain-like 478 560 IPR009057 -
Tsu07g02741 563 MobiDBLite consensus disorder prediction 1 25 - -
Tsu07g02741 563 PIRSF Txn_adaptor_ADA2 35 562 IPR016827 GO:0003713|GO:0006357|GO:0035065
Tsu07g02741 563 Gene3D - 475 560 IPR036388 -
Tsu07g02741 563 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 1 561 IPR034318 GO:0003713|GO:0006357|GO:0035065
Tsu07g02741 563 Pfam Zinc finger, ZZ type 48 87 IPR000433 GO:0008270
Tsu07g02741 563 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 1 561 - -
Tsu07g02741 563 MobiDBLite consensus disorder prediction 425 446 - -
Tsu07g02741 563 ProSiteProfiles SWIRM domain profile. 475 563 IPR007526 GO:0005515
Tsu07g02741 563 SUPERFAMILY RING/U-box 48 111 - -
Tsu07g02741 563 SMART zz_5 44 88 IPR000433 GO:0008270
Tsu07g02741 563 Gene3D - 102 153 - -
Tsu07g02741 563 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Tsu07g02741 563 ProSiteProfiles Myb-like domain profile. 108 151 IPR001005 -
Tsu07g02741 563 CDD ZZ_ADA2 48 96 IPR041983 -
Tsu07g02741 563 Gene3D - 43 96 IPR043145 -
Tsu07g02741 563 SUPERFAMILY Homeodomain-like 101 154 IPR009057 -
Tsu07g02741 563 SMART sant 104 153 IPR001005 -
Tsu07g02741 563 MobiDBLite consensus disorder prediction 417 466 - -
Tsu07g02741 563 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
Tsu07g02741 563 Pfam Myb-like DNA-binding domain 107 148 IPR001005 -
Tsu07g02741 563 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 155 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02741 Tsu-Chr7 32123935 32137880 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02741 1 558 EF-hand Containing Proteins AT3G07740 52.613 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tsu07g02741 Myb_DNA-binding 9.8e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02741 K11314 - gmx:100779424 831.632