Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02731 ATGACGACAGGTAGACATGGGGATTATCGCGATGAGGAATTCAGGGATAGTGACTCTGATTTTGGTATTTCAAGGCGTGGATTTAGTAGTAGTTTTAAGGAAGAGTATGATGGGATTCGAAACGGTACGGGTCGGAGTAGGGATGATAGAGAGGGGATTATTCAGAGACAGAGAGAAGTTTTGAATGGTAGTTACCGGTCAACTTCGAGTAGGAGTGACTCTGACAGCAGCAGTGGCCGTGGTGATAGACTTGGTTCTAGAAGATGTGAGTTTTCTGTCAAGACTATAGATAGGGAGCCAGGTGAGCTTTCTAGTGAGAGTGAGTCTGATGATGGTGTTGAATCAGAGTCACTGGTAAAATGCCATAAGGAGGTTGTGATGGGAAAAGAGTTTGATTATGGTGTTGAATCAGGATCAGTGTTGAAACGCCATCAGGTTGCAACTGGCAAAGAAAATGGGACTCGGTCTCCATTTGAGAGGAAAAGAAAATTTTCGCTGATAGTATGGGATCAAGATGACAACAAAGTGAATAATTTATCCAAACTTAAAGTTGTCACAACACCAGCTATTCTTCCTCCACCACCTCTATTTCCAAGAGCATTTCGTAAGTCGCCTAATGTTCCTTACAATGGAGTTGAAGTTCATCCTCCTGAGAATCCTGAGTTGCCGACTGCTATGAATCCTTCTATGGTGTCTGAGTCAGTTCAAGATGCTGAATCTGAGTCTCCTGTAGGTTTGGATTCACAGAGGTTGGTTAATGTGCGGGTAGCCGAGCAACCAGAAGTTGAAGATTATGTTCCAAATCGTAATATATCGTCTTCAAGATGGGCATCTGGAGATGAATCTTCGGATGATGAAGGTGAAATCATTGATGAGAAGGAATTCCTTAGAAGGAGGAGGCTATCTCCTAAGTCGGGTATAAGAAACAAGACTTTGAAACCAAAGGAATCTAAAATTGAAGGTTTTGATAGGGCTAGAACCAAGTCATCTGAATCGGAAGAAAGAGGTAGCACTGGGAGAtactatgatgaagatgatcaTCCTGGTATTGAGGCAGAGAAGGATAGCTACATGGAGATTGATGGCGGAGTTTGCAAAAGTGACACAAGTGGTAGTCACACAAATACTGATTCTGAACATGAAGATGATGGCAGAGAAAGTATGGAACCTCCGGTTCCACCACACAGAGTTGTCAACATGCTTCTGGGCTGTAGAAGTGTTGATGAGTTTGAGAGATTGAACAAGATTAATGAAGGAACATATGGTGTGGTATTTAGGGCCAAAGACAAGAAGACTGGTGAAATAGTGGCATTGAAAAAGGTGAAGATGGAGAAGGAAAAAGAAGGCTTTCCACTGACTTCTCTGAGGGAAATAAACATACTTCTTTCCTTTCATCATCCATTCATAGTTGACGTTAAGGAAGTAGTGGTAGGTAGTAGCCTTGATAGTATTTTTATGGTTATGGAATACATGGAACATGATCTTAAAGGACTAATGGAGGCAATGAGACAACCATTTAGCCAGAGTGAAGTAAAATGCTTAATGCTCCAGCTGTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCACAGGGATATGAAGACTTCAAACCTGCTTCTGAATAATAAGGGTGAGTTAAAAATTTGCGATTTCGGATTAGCTCGTCAGTATGGGAGTCCATTGAAACCATATACATCATTGGTGGTTACTCTTTGGTACAGGGCTCCTGAACTTCTTTTGGGGACAAAGCAGTATTCAACAGCCATTGACATGTGGTCCCTTGGTTGTATAATGGCTGAGCTACTGGCCAAGGAACCGTTATTTAATGGGAGGAATGAATTTGATCAACTTAATAAGATCTTCAGAATTCTCGGCACCCCAAATGAAACAATTTGGCCTGGGTTCTCAAAATTACCTCAAGTCAAGGCCAATTATGTTAAGCATCAGTATAATCTACTGCGCAAAAAGTTTCCTGCAACATCATTCACTGGATCCCCAGTTCTTTCTGATTCTGGATTAGATCTGTTGAACAAGCTTCTCACTTATGACCCTGAAAAGAGGATCACTGCTGAAGATGCTCTCAACCATGAGTGGTTTCGTGAAGTTCCCCTACCCAAATCTAAAGAATTCATGCCTACATTTCCCGCTCAACATGATAAAGACAGGAGAATGCGAAAAATAATGAAGAGTCTACATCTGTTAGAGGAGAAACACTAG 2223 0.4134 MTTGRHGDYRDEEFRDSDSDFGISRRGFSSSFKEEYDGIRNGTGRSRDDREGIIQRQREVLNGSYRSTSSRSDSDSSSGRGDRLGSRRCEFSVKTIDREPGELSSESESDDGVESESLVKCHKEVVMGKEFDYGVESGSVLKRHQVATGKENGTRSPFERKRKFSLIVWDQDDNKVNNLSKLKVVTTPAILPPPPLFPRAFRKSPNVPYNGVEVHPPENPELPTAMNPSMVSESVQDAESESPVGLDSQRLVNVRVAEQPEVEDYVPNRNISSSRWASGDESSDDEGEIIDEKEFLRRRRLSPKSGIRNKTLKPKESKIEGFDRARTKSSESEERGSTGRYYDEDDHPGIEAEKDSYMEIDGGVCKSDTSGSHTNTDSEHEDDGRESMEPPVPPHRVVNMLLGCRSVDEFERLNKINEGTYGVVFRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPFIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMRQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDMKTSNLLLNNKGELKICDFGLARQYGSPLKPYTSLVVTLWYRAPELLLGTKQYSTAIDMWSLGCIMAELLAKEPLFNGRNEFDQLNKIFRILGTPNETIWPGFSKLPQVKANYVKHQYNLLRKKFPATSFTGSPVLSDSGLDLLNKLLTYDPEKRITAEDALNHEWFREVPLPKSKEFMPTFPAQHDKDRRMRKIMKSLHLLEEKH 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02731 740 CDD STKc_CDC2L1 404 701 IPR045267 GO:0004674|GO:0005524|GO:0006468
Tsu07g02731 740 Pfam Protein kinase domain 410 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02731 740 MobiDBLite consensus disorder prediction 30 56 - -
Tsu07g02731 740 MobiDBLite consensus disorder prediction 60 75 - -
Tsu07g02731 740 MobiDBLite consensus disorder prediction 1 22 - -
Tsu07g02731 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Tsu07g02731 740 MobiDBLite consensus disorder prediction 1 118 - -
Tsu07g02731 740 MobiDBLite consensus disorder prediction 309 361 - -
Tsu07g02731 740 ProSiteProfiles Protein kinase domain profile. 410 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02731 740 MobiDBLite consensus disorder prediction 211 392 - -
Tsu07g02731 740 MobiDBLite consensus disorder prediction 225 247 - -
Tsu07g02731 740 PANTHER CELL DIVISION PROTEIN KINASE 148 732 - -
Tsu07g02731 740 Gene3D Phosphorylase Kinase; domain 1 396 492 - -
Tsu07g02731 740 MobiDBLite consensus disorder prediction 76 105 - -
Tsu07g02731 740 SMART serkin_6 410 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02731 740 PANTHER - 148 732 - -
Tsu07g02731 740 SUPERFAMILY Protein kinase-like (PK-like) 402 707 IPR011009 -
Tsu07g02731 740 MobiDBLite consensus disorder prediction 373 390 - -
Tsu07g02731 740 Gene3D Transferase(Phosphotransferase) domain 1 493 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02731 Tsu-Chr7 31988818 31994834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02731 384 721 Core Cell Cycle Gene Families AT5G10270 46.459 5.06e-96 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Tsu07g02731 Pkinase 4.2e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02731 K08818 - gmx:100793729 958.362