Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02711 ATGGTTATGGTTAtggcagaggaagaagagaacGCGTTATCGATCGAACCAGAATTTCCGAAGAGTCGAGTGAAGAAGATAATGACTCTAGATGAAGATGTGAAGAGAGTGAGTTCAGAAGCGTTGTTTTTAGTTTCGAAATCTACGGAGCTTTTTTTACAGTTACTTGCTGAAAAGTCTGCGGAAGTTGTAATTGAGAAGAAACGCAAGACGGTGAAGCTTGAACATATAAGAATCGCGGTGAAGAGAAACCGGCCGATAAGTGATTTTCTCCTTGATTCACTTCCGATGCCTTCTGAAACCACCAAATCTGATAAACCGGTGGTGGTTGTTGATCGGCCTAAATCTGTTCCCGTTGGTACTCGCCGTATCGATCAAATTTTCCGACAGTCAGAAGCCCAAGCCCAAGTAGAAGCTGAAGTTGAAGCCCAGGCAGAAGTTCAAGTAGAAGCCCAAGTAGAAGGTCAAATTGAAGATGAAGCTCAGGCGTCCGAACCGGTGCCGGAACCCATGGAGGAGTCATAG 525 0.4324 MVMVMAEEEENALSIEPEFPKSRVKKIMTLDEDVKRVSSEALFLVSKSTELFLQLLAEKSAEVVIEKKRKTVKLEHIRIAVKRNRPISDFLLDSLPMPSETTKSDKPVVVVDRPKSVPVGTRRIDQIFRQSEAQAQVEAEVEAQAEVQVEAQVEGQIEDEAQASEPVPEPMEES 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02711 174 SUPERFAMILY Histone-fold 17 84 IPR009072 GO:0046982
Tsu07g02711 174 Gene3D Histone, subunit A 2 97 IPR009072 GO:0046982
Tsu07g02711 174 PANTHER NUCLEAR FACTOR Y, SUBUNIT C13 7 132 - -
Tsu07g02711 174 MobiDBLite consensus disorder prediction 151 174 - -
Tsu07g02711 174 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 132 - -
Tsu07g02711 174 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 18 81 IPR003958 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02711 7 135 CCAAT-HAP5 Transcription Factor Family AT5G43250 58.140 2.65e-45 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Tsu07g02711 CBFD_NFYB_HMF 2e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02711 - - gmx:100790556 179.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02711 07 31754981 31755505 Tsu07g02711 07 31754981 31755505 ECH