Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02684 ATGAGTTTGTTACATGTAATTGGGTTTGGTCTAAAAGTTGGGCATCTACTTTTAGTGCTATGTTGTTGGATTGTATCTGTAATTTATATAAACTGGTTTGTTAGTATGGATAGTACAAAGATGGGATTTTTAGGAGATGGTGGTAAGATGTGGCTTAAATGGTGGGAGAAGATCTTAGGTAGTACATGTAAAATTCATCAACAATATTATCAGTGTATTGGGTCTAAAAGAGTTAGGAGAGTTTTGTGGAAGAAATTGTTGTTAGTATGGGTTTTGATTTGGTGTATAGTTTCTTTGTGGAtcttttgttttatgaatttacAAGTTACTGAAAAAAGGAAAGAGACTTTAGCTAGTATGTGTGATGAAAGAGCTAGGATGTTACAAGATCAGTTTAATGTTAGTATGAATCATATTCAAGCTATGTCTATTCTTATCTCAACTTTTCATCATGCCAAAATCCCTTCTGCTATTGATCAGAAAACTTTTGCAAAGTATACAGAAAGAACTGCTTTTGAGAGGCCACTTACGAGTGGTGTTGCATATGCGGTAAGGGTGCTTCAATCTGAAAGGGAACAATTTGAGAAGCAACAAGGGTGGACTATTAAGAGGATGGATACTTTGGAACAGAATCCGGTTCATGAGGATGACTATGTAGCAGATGCATTGGAACCATCCCCTATTCATGAAGAATATGCGCCTGTTATCTTTGCGCAGGATACAATCTCACATGTCATATCTATTGACATGCTTTCTGGAAAGGAAGACCGTGAAAATGTGTTGCGTGCAAGAGAATCGGGCAAAGGGGTTCTAACCGCTCCTTTCAGGCTGTTGAAAACAAATCGTTTAGGGGTTATCCTCACATTTGCTGTTTACAAGAGAGATCTTCCATCAAATGCTACGCCAAATGAAAGGATTCAAGCAACTGATGGATATCTTGGTGGAGTGTTTGAAATAGAGTCATTAGTGGAGAAATTGCTTCAGCAACTTGCTAGCAAGCAAACCGTGCTCGTTAACGTGTATGATACAACAAATCGCACACACCCAATTCCTATGTATGGTTCTGTTGTATCAGGTGATGAGTTCTATCATGTGAGCTTTCTTAACTTTGGAGATCCTTTCAGAAAGCATGAGATGCACTGCAGGTTCAAACAGAAACCACCATGGCCATTGATGGCAATAGGTACATCGATCGGAATTCTTATTATTGCACTCCTTGTTGGACATATATTTCACGCAACTGTGAATCGAATTGCTAATGTAGAGGAAGATTACCACAAGATGATAGAACTTAAGAAACGAGCTGAGGCAGCTGATGTTGCTAAATCTCAAGTATGTGATTTTTTGCCGtcacttttaagtttttatttattcagGCTTGAGTTAAACCAATCATATAAGCTGAATCAATTATCAACACTGCAGTTCCTTGCTACTGTTTCGCACGAGATCAGAACTCCGATGAATGGTGTTTTAGGGATGATGAATATGCTAATGGACACTGATCTAGATGTAACCCAACAGGAATATGTTAGAACTGCACAATGCAGTGGAAAAGCTTTGGTGTCAATTATAAATGAAGTTTTGGACCAGGCAAAGATTGAATCTGGTAAGCTAGAGCTTGAGGCTGTGCTGTTCGATATACGAGCAATTATGGATGATGTGTTATCGCTATTTTCTGAGAAGTCTCAAGGAAAAGGAGTAGAGTTAGCAGTTTACGTCTCGGATCAGGTTCCTCGACAGCTTATAGGTGATCCAGGACGGTTTCGACAAATAATTACGAATCTCATGGGTAACTCAATTAAGTTTACCGACAAAGGGCATATCTTTGTCACTATCCATCTTGTTGAGGAGGTTTTCCATTCGATAGAGGTTGAAAGAGAATCCACTTCAAAAGATACAGAAGATACATTGAGTGGTTTCCCAATTGCTGATGGTCGCCGGAGCTGGGAAGGATTCCAAGCTTTTAGTCATGAAGGACCGCTTGGTTCTTTCTCATCATCCGCctcctcttcctcctcctcctccaatGATTTCATCAATTTGATTGTATCAGTTGAGGATACAGGCGACGGTATTCCTCTCGAGTCTCAGCCGAAAATATTCACTCCATTCATGCAGGTAGGTCCATCTATATCAAGAAAACACGGGGGAACCGGTATTGGTTTAAGCATTAGCAAGTGTTTGGTTGGCCTTATGAATGGAGAAATCGGATTTGTGAGTGAACCGAAGATCGGGAGCACTTTCACATTTACAGCTGTTTTTACCAATGCATGTCCTAATTCAAATGAGTTTAATAAAACTCAGCAAATCAACAACCAACCTCATCCTGCATCCTCGGAGTTTCTTGGTATGGCTGCACTAGTTATTGATCCGAGACCCGTTAGAGCTGAAGTGTCAAGATATCACATCCAAAGGCTTGGCGTTCAAGTTGAAATAGTTTCAGATTTGAAGCAAGGTTTGTCCGCCGTAACTGATGGGAACGTAGCTATCAATATGGTCCTGATTGAACAAGAGGTTTGGGAAAGAGACTCAACCATGTCATCACACTTTGTGAATAACATTAGGAAAATTGCTGAAGTTGATAAAGGAATTCCTCCAAAACTATTCATTCTTGTTAATTCTAGTAGTTCTTTTAAAGCTAGTTCTGCGACATCATGTGTTCATAATCCAACAGTAGTCACAAAACCTTTAAGAGCAAGTATGCTAGCTGCTTCACTACAAAGAGCAATGGGTGTTGGGAACAAAGGGAATCCTCGAAACGGAGAACATCAAGCCTTGTCTCTCAACCATCTTCTCTCTGGGAGAAAGATTCTTATTGTAGATGATAATAGTGTGAATCGCACGGTAGCTGCTGGCGCATTGAAAAAATATGGAGCTGGTGTGGTTTGTGTAAGCAGTGGAATAGAAGCCATCACTATGCTAACGCCACCCCATGAGTTTGATGCGTGTTTCATGGATATTCAAATGCCTGAAATGGATGGGTTTGAAGCTACAAAAAAAATTCGACACAATGAAAACAGTGAAAACAACAAAGAATTGTCTATTCATCTACCGATTTTGGCTATGACCGCAGACGTAATCCAGGCTACACACGAGGAATGTTTAAAGCATGGAATGGATGGATATGTTTCAAAACCATTTGAAGCTGAACAACTTTATAGAGAGGTTTCAAAGTTTTTCTAA 3186 0.3889 MSLLHVIGFGLKVGHLLLVLCCWIVSVIYINWFVSMDSTKMGFLGDGGKMWLKWWEKILGSTCKIHQQYYQCIGSKRVRRVLWKKLLLVWVLIWCIVSLWIFCFMNLQVTEKRKETLASMCDERARMLQDQFNVSMNHIQAMSILISTFHHAKIPSAIDQKTFAKYTERTAFERPLTSGVAYAVRVLQSEREQFEKQQGWTIKRMDTLEQNPVHEDDYVADALEPSPIHEEYAPVIFAQDTISHVISIDMLSGKEDRENVLRARESGKGVLTAPFRLLKTNRLGVILTFAVYKRDLPSNATPNERIQATDGYLGGVFEIESLVEKLLQQLASKQTVLVNVYDTTNRTHPIPMYGSVVSGDEFYHVSFLNFGDPFRKHEMHCRFKQKPPWPLMAIGTSIGILIIALLVGHIFHATVNRIANVEEDYHKMIELKKRAEAADVAKSQVCDFLPSLLSFYLFRLELNQSYKLNQLSTLQFLATVSHEIRTPMNGVLGMMNMLMDTDLDVTQQEYVRTAQCSGKALVSIINEVLDQAKIESGKLELEAVLFDIRAIMDDVLSLFSEKSQGKGVELAVYVSDQVPRQLIGDPGRFRQIITNLMGNSIKFTDKGHIFVTIHLVEEVFHSIEVERESTSKDTEDTLSGFPIADGRRSWEGFQAFSHEGPLGSFSSSASSSSSSSNDFINLIVSVEDTGDGIPLESQPKIFTPFMQVGPSISRKHGGTGIGLSISKCLVGLMNGEIGFVSEPKIGSTFTFTAVFTNACPNSNEFNKTQQINNQPHPASSEFLGMAALVIDPRPVRAEVSRYHIQRLGVQVEIVSDLKQGLSAVTDGNVAINMVLIEQEVWERDSTMSSHFVNNIRKIAEVDKGIPPKLFILVNSSSSFKASSATSCVHNPTVVTKPLRASMLAASLQRAMGVGNKGNPRNGEHQALSLNHLLSGRKILIVDDNSVNRTVAAGALKKYGAGVVCVSSGIEAITMLTPPHEFDACFMDIQMPEMDGFEATKKIRHNENSENNKELSIHLPILAMTADVIQATHEECLKHGMDGYVSKPFEAEQLYREVSKFF 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02684 1061 Pfam CHASE domain 157 353 IPR006189 -
Tsu07g02684 1061 Gene3D - 536 758 IPR036890 -
Tsu07g02684 1061 ProSiteProfiles Histidine kinase domain profile. 479 757 IPR005467 -
Tsu07g02684 1061 CDD HisKA 475 533 IPR003661 GO:0000155|GO:0007165
Tsu07g02684 1061 Pfam His Kinase A (phospho-acceptor) domain 475 537 IPR003661 GO:0000155|GO:0007165
Tsu07g02684 1061 Gene3D - 919 1060 - -
Tsu07g02684 1061 CDD PRTases_typeI 890 965 IPR000836 -
Tsu07g02684 1061 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 584 755 IPR003594 -
Tsu07g02684 1061 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 526 752 IPR036890 -
Tsu07g02684 1061 Coils Coil 418 438 - -
Tsu07g02684 1061 ProSiteProfiles CHASE domain profile. 154 380 IPR006189 -
Tsu07g02684 1061 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 474 538 IPR036097 GO:0000155|GO:0007165
Tsu07g02684 1061 SMART HisKA_10 472 537 IPR003661 GO:0000155|GO:0007165
Tsu07g02684 1061 Gene3D - 105 157 - -
Tsu07g02684 1061 ProSiteProfiles Response regulatory domain profile. 937 1061 IPR001789 GO:0000160
Tsu07g02684 1061 CDD REC_hyHK_CKI1_RcsC-like 938 1057 - -
Tsu07g02684 1061 SUPERFAMILY CheY-like 933 1059 IPR011006 -
Tsu07g02684 1061 Pfam Response regulator receiver domain 938 1056 IPR001789 GO:0000160
Tsu07g02684 1061 Gene3D CHASE domain 158 387 IPR042240 -
Tsu07g02684 1061 Gene3D - 459 535 - -
Tsu07g02684 1061 SMART REC_2 936 1057 IPR001789 GO:0000160
Tsu07g02684 1061 SUPERFAMILY CheY-like 784 912 IPR011006 -
Tsu07g02684 1061 SMART CHASE_2 154 355 IPR006189 -
Tsu07g02684 1061 PANTHER TWO-COMPONENT HISTIDINE KINASE 462 1061 - -
Tsu07g02684 1061 PANTHER TWO-COMPONENT HISTIDINE KINASE 53 445 - -
Tsu07g02684 1061 CDD HATPase_EvgS-ArcB-TorS-like 589 755 - -
Tsu07g02684 1061 SMART HKATPase_4 584 757 IPR003594 -
Tsu07g02684 1061 PRINTS Bacterial sensor protein C-terminal signature 682 696 IPR004358 GO:0016310|GO:0016772
Tsu07g02684 1061 PRINTS Bacterial sensor protein C-terminal signature 717 735 IPR004358 GO:0016310|GO:0016772
Tsu07g02684 1061 PRINTS Bacterial sensor protein C-terminal signature 741 754 IPR004358 GO:0016310|GO:0016772
Tsu07g02684 1061 PRINTS Bacterial sensor protein C-terminal signature 700 710 IPR004358 GO:0016310|GO:0016772
Tsu07g02684 1061 ProSiteProfiles Response regulatory domain profile. 786 911 IPR001789 GO:0000160
Tsu07g02684 1061 PANTHER HISTIDINE KINASE 3 462 1061 - -
Tsu07g02684 1061 PANTHER HISTIDINE KINASE 3 53 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02684 Tsu-Chr7 31356300 31362419 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02684 1 1061 Miscellaneous Gene Families AT1G27320 64.885 0.0 1364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu07g02684 CHASE 2.1e-36 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02684 K14489 - gmx:100801546 1594.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02684 07 31356300 31362419 Tsu07g02684 07 31356300 31362419 ECH