Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02678 ATGgctttattttctctctttctccttACACTTCTTGTGTTAATATCATGTTCATCTTCTCAACTTCAAGAGTTTATAAGCATTGATTGTGGAGGAACAAGAAGTAACTACACTGACACAACCACAGGGATAACATGGATTTCAGATTCTGAGATAATGAAACATGGACAGAAAGTGGAAGTAATAAACCCTAATGGAAACCAAGTTCAGTATCAGAAACGAAGAGTTTTTCCAACAGATAGCAGAAAATATTGTTATACACTTGAAACTGAAGAGAGAAGAAGGTATTTGGTAAGAGCAACTTTTCAGTATGGAAATTTGACAAATGGAGGTACATACCCTCAGTTTCAACTTTATTTGGATGCAACAAAATGGGCTACTGTGTCAATTTATGATGGTAAAAGAGTATTTGTTAAGGAAATTATCTTTAGGGCGTCTTCGAATTCTGTTGATGTTTGTGTTTGTTGTGCTACAACTGGTTCTCCTTTTATATCTACTGTTGAGCTTAGGCCTTTGAATCTTTCTATGTATGCAACTGATTTTGAGGATGACTTCTTCTTGAAAGTAGCTGCAAGGATTAACTTTGGTGCTCCAACTGAGGATGCTGTCAGGTATCCGGAGGATCCATATGATAGAATATGGGAGTCTGATCTTgttaaaagacaaaattatcTTGTCGGGAAGGCAACAGGAACAGAAAGAATTAGCACAACAAGGAACATAGAAATAGAGACAAGAGAATATCCGCCGGTTAAGGTGATGCAAACTGCAGTTGTTGGCACAAAAGGGTTACTTAGCTACAGACTTAACCTTGAGGACTTTCCTGCTAATGCTAGAGCTTATGCTTATTTAGCAGAGATTGAAGATTTAGGTCAGAATGAGACTAGGAAATTCAAATTGGCACAACCTTATTTTCCTGACTATAGCAATGCAGTGGTGAACATAGCTGAGAATGCTAATGGAAGCTACACTCTTTATGAACCAAGTTACATGAATGTGAGTTTGGAATTTgttctttccttttcttttaagAGGACGCCGGATTCGACTAGAGGACCGCTATTAAATGCAATGGAAATAAGCAAATATCAAGAAATTGCTTCAAAGACCTCCAAGCAAGATTCAAATTGTGTAAGTGCATTTGCCACCTTGTCTGATGAAATTATCCCGAAGAATGAAGGCGATCCGTGTGTTCCGACTTCCTGGGAATGGGTGAATTGTAGTACTATTGCACCTCCAAGAATTACAAAGATAAACTTGACACGAAGGAATTTGACCGGTGAAATCCCGCGAGAGCTCAACAACATGGATGCATTGGAAGAACTgTGGTTAGCTGGAAACTTGCTCACAGGACAACTACCAGATATGAGCAATCTTATCAATCTAAAGATTGTGCATCTAGAGAACAACAAATTGACCGGTTCACTACCGTCTTACCTGGGTAGCTTGCCAAGTTTACAAGCATTGTACATACAGAATAACTCATTTACCGGGGTTATACCAGCAGGATTATTATCTACAAAAATCACTTTCAACTATGATAATAATCCTGGACTACgtaaaaagaacaaaaagcaTTTTCAGTTGATAATAGGAATTGCTATCGGAGTACTAGCGATTCTACTAGTCTTGTTCTTAGCAAGTTTGGTGTTATTGCATTACCTAAGGAAAAAAGCTTCTCAAAAGAGAAGTGATGAAAAAGGTATTTCAGGACGTAGCACTAAACATATAACTGGATACTCTTTCGGTGTGGATGGAAATTTAATGGATGAAGGTACTGCATACTATATTAATCTCTCGGATTTGAAAGAAGCTACGaacaatttttcaaagaaaattggAAAAGGAAGCTTTGGATCTGTCTATTATGGAAAAATGAAAGATGGAAAAGAAATCGCAGTTAAGACTATGACCGATCCATCCAGCTATGGGAACCATCAATTTGCAACTGAGGTAGCTCTCTTATCGAGAATACATCACAGAAACTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATATCAGCATATTCTAGTTTATGAGTATATGCACAATGGCACTTTAAGGGATCACATTCATGAATGTTCGAGTCAGAAGCAATTAGACTGGTTAACTCGTCTTCGAATTGCAGAAGATTCAGCCAAAGGTCTTGAATATTTACACACTGGATGCAATCCTAGTATCATTCACCGAGACGTAAAGACAAGCAACATTCTCCTAGACATCAATATGAGAGCAAAAGTATCAGATTTTGGACTCTCGAGACTAGCCGAAGAAGATTTAACACATATATCAAGTGTTGCAAGGGGAACTGTGGGCTACTTGGATCCTGAGTACTATGCAAATCAGCAATTGACCGAAAAGAGCGATGTATACAGTTTTGGAGTTGTTTTATTGGAACTGATATCCGGAAAGAAGCCTGTATCACCGGAAGATTATGGTCCAGAAATGAATATAGTTCATTGGGCAAGATCTTTAATTCGAAAAGGCGATATAATTAGCATTATGGATCCTTTACTAATTGGAAATGTGAAAACTGAGTCAATATGGAGGGTTGCTGAAATTGCCATGCAATGTATAGAACCACATGGTGCATCTAGGCCAAGGATGCAAGAAGTGATTTTGGCAATACAAGATGCTTCTAAGATAGAAAAAGGGACAGAAAGTCAACAAAAGATATCATCATCTTCAGGTGATTCAAAACCACAATCTTCAAGGAAAACTTTGCTTACAAGTTTTCTTGAAATTGAAAGCCCTGATTTACCAAATGGTTGTCTTCCATCAgcaagataa 2793 0.3652 MALFSLFLLTLLVLISCSSSQLQEFISIDCGGTRSNYTDTTTGITWISDSEIMKHGQKVEVINPNGNQVQYQKRRVFPTDSRKYCYTLETEERRRYLVRATFQYGNLTNGGTYPQFQLYLDATKWATVSIYDGKRVFVKEIIFRASSNSVDVCVCCATTGSPFISTVELRPLNLSMYATDFEDDFFLKVAARINFGAPTEDAVRYPEDPYDRIWESDLVKRQNYLVGKATGTERISTTRNIEIETREYPPVKVMQTAVVGTKGLLSYRLNLEDFPANARAYAYLAEIEDLGQNETRKFKLAQPYFPDYSNAVVNIAENANGSYTLYEPSYMNVSLEFVLSFSFKRTPDSTRGPLLNAMEISKYQEIASKTSKQDSNCVSAFATLSDEIIPKNEGDPCVPTSWEWVNCSTIAPPRITKINLTRRNLTGEIPRELNNMDALEELWLAGNLLTGQLPDMSNLINLKIVHLENNKLTGSLPSYLGSLPSLQALYIQNNSFTGVIPAGLLSTKITFNYDNNPGLRKKNKKHFQLIIGIAIGVLAILLVLFLASLVLLHYLRKKASQKRSDEKGISGRSTKHITGYSFGVDGNLMDEGTAYYINLSDLKEATNNFSKKIGKGSFGSVYYGKMKDGKEIAVKTMTDPSSYGNHQFATEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLRDHIHECSSQKQLDWLTRLRIAEDSAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGKKPVSPEDYGPEMNIVHWARSLIRKGDIISIMDPLLIGNVKTESIWRVAEIAMQCIEPHGASRPRMQEVILAIQDASKIEKGTESQQKISSSSGDSKPQSSRKTLLTSFLEIESPDLPNGCLPSAR 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02678 930 PANTHER - 12 897 - -
Tsu07g02678 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Tsu07g02678 930 SMART serkin_6 607 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02678 930 Pfam Protein tyrosine and serine/threonine kinase 609 874 IPR001245 GO:0004672|GO:0006468
Tsu07g02678 930 PANTHER OS07G0107800 PROTEIN-RELATED 12 897 - -
Tsu07g02678 930 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Tsu07g02678 930 SUPERFAMILY L domain-like 397 507 - -
Tsu07g02678 930 MobiDBLite consensus disorder prediction 885 912 - -
Tsu07g02678 930 MobiDBLite consensus disorder prediction 885 930 - -
Tsu07g02678 930 Gene3D Phosphorylase Kinase; domain 1 584 682 - -
Tsu07g02678 930 SUPERFAMILY Protein kinase-like (PK-like) 593 874 IPR011009 -
Tsu07g02678 930 Pfam Malectin-like domain 28 362 IPR024788 -
Tsu07g02678 930 Gene3D Transferase(Phosphotransferase) domain 1 683 902 - -
Tsu07g02678 930 Gene3D Ribonuclease Inhibitor 367 525 IPR032675 -
Tsu07g02678 930 ProSiteProfiles Protein kinase domain profile. 607 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02678 930 CDD STKc_IRAK 613 874 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02678 Tsu-Chr7 31258444 31264777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02678 9 930 Receptor kinase-like Gene Family AT1G67720 68.324 0.0 1263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Tsu07g02678 Malectin_like 4e-88 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02678 - - gmx:100798488 1518.06