Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02669 ATGTATCTATCATCAGAAAAGCCTCGTCCAATTGATTTCTACAAAGAAGAAACAAGAGACATGATGATGGAAGTTGTAACTAACTCCGAtcttccaccaccaccaccaccaccgcaACCACAACCGCAACAACACCACCACCAACTCCAACCACCACCACCGCCGCCGCAAATGATTCTCGCTGCTGAAAGTAGCGGCGAAGATCCTGAGATGGAGATCAAAGCTCCTAAAAAACGAGCTGAAACTTGGGTACAAGATGAGACACGAAGTCTCATTGGTTTAAGAAGAGAGATGGATTCACTTTTCAATACTTCGAAATCGAATAAACATCTTTGGGAACAAATTTCGGCTAAGATGAGAGAAAAGGGTTTCGATCGGTCACCGACTATGTGTACTGATAAATGGAGGAATCTATTGAAAGAGTTTAAGAAAGCTAAACATCATCAAGATAGAGGTGGAAGTGGTTCTGGTAAAATGAGTTGTTATAAAGAGATTGATGAGATCTTAAGAGAGAGGAGTAAGTGTGCTCAGTATAAGACTCTTACTCCTTCTTCTAAAGTTGAATCTTCTTACATGCAATTTGCTGATAAAGGTATTGATGATGCCAACATTTCTTTTGGGCCTGTTGAAGCTTCTGGAAGACCAACACTCAATCTTGAAAGAAGTTTGGATCATGATGGACATCCTCTTGCCATTGCCGCAGCTGAAGTTGCAGCAAGTGGAGTCCCTCCTTGGAATTGGAGAGAAACTCCCGGAAATGGTGGGGAAACTCAGTCTTGTTGCGGAAGGGTTATATCAGTCAAATGGGGCGATTATACCAGACGAATAGGTATTGATGGCACTCCGGAAGCCATCAAAGAGGCAATCAGGGCTGCTTTTAGGTTGAGAACTAAACGTGCATTTTGGTTGGAGGATGAGGAGCAAATTATCAGAAGCATTGACCGTGACATGCCTATAGGAAACTACACTCTTCACCTTGATGAAGGAATGGCCATTAAAGTCTGCCTATATGATGAGTCTGACCGTATCCCTGTGCATACTGAAGAGAAGATATTTTACACCGAGGATGATTACCGTGATTTTCTGGCACGCCGGGCTTGGACATGTCTGCGAGATCTTGATGGCTATAGAAATATTGACAATATGGATGATCTTCGACCTGGTGCCATATACCGAGGTGTAAGTTGA 1188 0.4175 MYLSSEKPRPIDFYKEETRDMMMEVVTNSDLPPPPPPPQPQPQQHHHQLQPPPPPPQMILAAESSGEDPEMEIKAPKKRAETWVQDETRSLIGLRREMDSLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHQDRGGSGSGKMSCYKEIDEILRERSKCAQYKTLTPSSKVESSYMQFADKGIDDANISFGPVEASGRPTLNLERSLDHDGHPLAIAAAEVAASGVPPWNWRETPGNGGETQSCCGRVISVKWGDYTRRIGIDGTPEAIKEAIRAAFRLRTKRAFWLEDEEQIIRSIDRDMPIGNYTLHLDEGMAIKVCLYDESDRIPVHTEEKIFYTEDDYRDFLARRAWTCLRDLDGYRNIDNMDDLRPGAIYRGVS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02669 395 Pfam Myb/SANT-like DNA-binding domain 82 168 IPR044822 -
Tsu07g02669 395 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 6 394 - -
Tsu07g02669 395 PANTHER - 6 394 - -
Tsu07g02669 395 MobiDBLite consensus disorder prediction 29 59 - -
Tsu07g02669 395 MobiDBLite consensus disorder prediction 9 23 - -
Tsu07g02669 395 SMART sant 79 141 IPR001005 -
Tsu07g02669 395 MobiDBLite consensus disorder prediction 1 69 - -
Tsu07g02669 395 SUPERFAMILY Formin homology 2 domain (FH2 domain) 33 38 - -
Tsu07g02669 395 CDD GT1 81 146 - -
Tsu07g02669 395 ProSiteProfiles Myb-like domain profile. 75 139 IPR001005 -
Tsu07g02669 395 Gene3D - 83 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02669 Tsu-Chr7 31142620 31149422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02669 55 394 Trihelix Transcription Factor Family AT3G25990 71.594 0.0 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tsu07g02669 Myb_DNA-bind_4 7.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02669 - - ccaj:109807736 644.81