Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02662 ATGGCTAGGTCCATTGATTCCATTAAAGATATCAATGATTTGAAAGAGCTATGGAAGTTGGCAGTTAGGATTGAAGATCTTTGGTCTGTTGTTAGCAAAAGCAAAGAAGAACATTTGGAATTTATCCTCCTAGATAAACAAGTGGGTGATCAGATACAAGTTGTTGTGCCTAATGACTTGCTTGAGCATTGTAAGTCTAACTTGAAAGAGGGTGGTACATATGTCATGAGGAATTTCAAGGTAAAGGAAAATGATTTTCCTTTCAAGGCATGTCATCATGCTTTTAAGCTCATTTTCAACTCCGGGACAAACGTCACTGTCAAAGATTTCCCCGACATTCCGTCTTGTAAATTCAACTTCAAGCCTTTTGCTGAGATCAATGCTGGAAACTACCAGTCAGATTGCTTATATGGTGATAAACATATTTTGTTTAGGGTTTGGTTGGGTTTCACTTCATTGTTTGCTGAGACTAAGTGtgGTGTGGAACTCAGCTGCACTCTCTGGGGTCATTTTGCGACTACTTTGTTCAATTATCTTAATGGAAGAACTAAAATTGGGCCCATTGTGATAATTATGAAGCATGGAAAGATCAAGGATGCTTCAGTTTACCTCCGGATTTTGCTTGCGCTGGAAAGTGTTGGCTCGACCCAAGGTTCCACGAGTTCTCAGTTTTCTGGTGGCGATCGCTTTTTAATTGGCGCGCCTATTATTCAGTTCTCGGAACTCATGAACTTGCCTGAGAACACCATATGCATCACAATGGCAACTACTAGGAAAATACTTACCTCAAAACATGGATGGTACTATAAACAATGTGATCATTGCCCCAAGAAGACCGACGGACATGCACCGCCTTACAAGTGCTTGCTTGACCATCCTTCTCCAAAACCTGTCATAAATAGTGGTGCTCCTGAATTTCCCGAATTTTCAACACAACTAACTATTGGTGCCATGACAGCTGCTAATGAAGTCATTCCAAGTTCAGATGATTCAACTCCTAAGAGTAAGAAAAACCATCAACCAGCATGGAACACTGCACAAAATTTGGTTTTAATTAGTGGTTGGATTAAATTTGGAACAAGCAGTATTGTCGGGAGAAACCAGAGAGGCGAAACATATTGGGGTAAAATTGCTGAGTATTGTAATGAGCACTGCTCATTCGATCCTCCGTGTGATATGATTTCATGCCGAAACCGTTTTAATTACATGAACAAAATACTGAATAAATGGATTGGCGCTTACGATGGAGCTAAGCGTATGCAAGCAAGCGGTTGGTCGGATAATGATGTGTTGGCAAAAGCTCAGGAACTATATGCATGTGGGAAGAATGTTCAATTCACTTTAATGGAAGAATGGCAAGCTGTCCGTGATGAACCACGTTTTAGAAGTCAAGCAGAAGGAAATGTTGGCTCGGGAAGTAGTGGATCTAAGAGATCTCGTGAGAGTGATGCATGTTCAAACTCTGTAGGATCTAGTGCTCGTCCTATAGGTAGGGATGCAGCAAAAAAGAAGGGTAAAAAGAAATCTGCCATGGAGATGGTGGACAAAGACTTTGAATCGTTCAGAGAAATTAAGTTGCAAGAGATAGAACAATTGGCAACATGGGAAGGTCAATTTACTAGGGGGGATAAGGGAATCACCACAGTTATTCTTGAAGCCGTTGCAACTCATGATCTATGGATTTGGCATGCCTTTTTTGGATGTCCGAGAACGTTGAACGACATAAACGTTCTAGACCATTCACCAGTTTTTGATGACGTGGAACAGGGAAAGACTCCAAGTGTGAATTACTACGTGAATCAACGTCCCTATGATATGAAATACTATCTAGCTGATGGTATTTACCCTTCTTATCCAACTTTCGTCAAATCAATTAGACTTCCTCAAAGTGAACCCGATAAGTTATTTGCTCAACATCAGGAGGGATGTCGGAAGGACATCTAA 1944 0.4079 MARSIDSIKDINDLKELWKLAVRIEDLWSVVSKSKEEHLEFILLDKQVGDQIQVVVPNDLLEHCKSNLKEGGTYVMRNFKVKENDFPFKACHHAFKLIFNSGTNVTVKDFPDIPSCKFNFKPFAEINAGNYQSDCLYGDKHILFRVWLGFTSLFAETKCGVELSCTLWGHFATTLFNYLNGRTKIGPIVIIMKHGKIKDASVYLRILLALESVGSTQGSTSSQFSGGDRFLIGAPIIQFSELMNLPENTICITMATTRKILTSKHGWYYKQCDHCPKKTDGHAPPYKCLLDHPSPKPVINSGAPEFPEFSTQLTIGAMTAANEVIPSSDDSTPKSKKNHQPAWNTAQNLVLISGWIKFGTSSIVGRNQRGETYWGKIAEYCNEHCSFDPPCDMISCRNRFNYMNKILNKWIGAYDGAKRMQASGWSDNDVLAKAQELYACGKNVQFTLMEEWQAVRDEPRFRSQAEGNVGSGSSGSKRSRESDACSNSVGSSARPIGRDAAKKKGKKKSAMEMVDKDFESFREIKLQEIEQLATWEGQFTRGDKGITTVILEAVATHDLWIWHAFFGCPRTLNDINVLDHSPVFDDVEQGKTPSVNYYVNQRPYDMKYYLADGIYPSYPTFVKSIRLPQSEPDKLFAQHQEGCRKDI 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02662 647 MobiDBLite consensus disorder prediction 466 493 - -
Tsu07g02662 647 CDD RPA1_DBD_A_like 19 105 - -
Tsu07g02662 647 Gene3D - 4 109 IPR012340 -
Tsu07g02662 647 MobiDBLite consensus disorder prediction 459 509 - -
Tsu07g02662 647 Pfam Plant transposon protein 533 647 IPR006912 -
Tsu07g02662 647 Pfam Domain of unknown function DUF223 42 136 IPR003871 -
Tsu07g02662 647 PANTHER - 302 513 - -
Tsu07g02662 647 SUPERFAMILY Nucleic acid-binding proteins 4 108 IPR012340 -
Tsu07g02662 647 PANTHER PUTATIVE-RELATED 302 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02662 Tsu-Chr7 31078681 31083601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02662 314 516 Glutathione S-transferase Gene Family AT5G41240 24.324 5.45e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02662 - - mtr:MTR_3g067785 331.643