Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02657 ATGAAAGACGAAATCAAATCAGAATTCAAAAAAGCAGGGTTCGGTTTCgacgaagaagaagagattctaAGCAAATGTCTAACTTTCTGCATCAACTACAGTCTCACCCCTTCCGATCTCGTCTCAAGCTGGGAAGTTTATTACCTTAACAGACAGCTAGATGAACCAACTGTACAAAATGCTGAAATGGAAGGATTTTTGTTGCATCTACAGAATAATGTGAAAGAAGATATTATAAAGGAGGAAACTGGTTTGCATCTTTATTCTATTGGAGATGTAGAAATGATCTTAAATAATGACGATGATACGAAGGACGATACTCCCAGCACACCAACGCATAATCGTCAAGAAGTTTATTCGCCTATACATGATACACCATCTTTGTATGGGAATGTTTTAGCATCTGGAAAGCCAGCCAATTTGGTTACACCTTTTTCAAAGAGGACGGATAGGTTTGCAGTGAAATTTAGCATCAACACCATTCCTGATGTAGAAAATGGAAAACAAGAACTTAATCGCGATAATGAAGAGGATGACGAGTTCAGTATTGTTTCAAAAGTCGTAAACCGAAAAAGGTGTTCATTGGTGATTCATGGATCAGGGCCGAAACCAGGTTGCAGATTTATGTATGATAGGACTGAGGATAGGATTAATGCAATAGAAAGCCGGATTAAAAAACATGCAAGAGCACTCGTAGCTTCTGGGCTCTATGAAGAACCAACAGACCCCACAATTGCATCACCAAGAAGCTTTTTTTCCGTCGGCATGATTTGTTGTGATGGAGAAGGCCGTCTTAACGAGAAATCTGTCATGTTGCAGAGCAGTATTGAGCATTCTGGAGGGGAATGTGTCCGCCTAGACTTACAACGTTTAAGCCATTTTTCAGTTTTCCCTGGCCAGGTAGTTGGAATCGGAGGCCATAATCCTAGTGGGCATTGCCTAGTTGCATCTAAATTGGTTGATGATATACCTACCTCTGTTGCTAACGAGGATTTGAATCCTTCAAAGAAGCAAGCTATGGATAAGGAGAATCAGCCAACTGAGCTGCTTTGTAATCCGAGAGAGTTGTCGATGATTATTGCGGCGGGACCTTTTACTACAACCGACAATTTGTTGTTTGAACCTCTTGTAGAACTGCTGGCATATGCAAAGCGAAGACCACCACAGCTACTTGTATTGCTGGGTCCATTTATTGACTCTGAACACCCAGACATCAAGAAAGGAACTGTGGACAGGGATTTTGATGAAATATTTCGTTTTGAAGTCTTGAAGAAGTTGGAAGATTATGTAGAATCTATGGGTTCAACAGTACGTGTTCTCCTTGTACCATCTATACGGGATGCTAACCatgattttgtttttcctcAGCCTGCATTTGATATCAGTCAACTTCAGATTGCCAGTCTCACTAATCCTGGAATCTTTGAGGCAAACGAGGTCAAAGTTGGTTGCTGCACTTTGGATGTTCTCAAGCAGATTAGCGGGGAGGAGATATCACGAATTGCAGCAGATGGAAAACCTATTGATCGTTTGAGTAGAATTGCAAACCATATTCTTAACCAACAGAGTTTCTATCCACTTTACCCGCCAGCAGAAAGTGTTCCCTTGGATTTTTCTCTGGCACCAGAAGCCCTTCAACTCTCATTGGTTCCAGATGTTCTTATCTTACCTTCAGACATCAAGTACTTTGTCAAGGTTCTTAATAACGAAAGCGAAGTTACCAACTGCAAGAAATGCATTGCCGTCAATCCGGGAAGATTAGCCAAAGGAGAGGGAGGAGGTACTTTTGTAGAGCTTGATTATAGTGGAGGTCCCGATAAAATTAACGCTTCAATTTTGGCCATATGA 1848 0.4048 MKDEIKSEFKKAGFGFDEEEEILSKCLTFCINYSLTPSDLVSSWEVYYLNRQLDEPTVQNAEMEGFLLHLQNNVKEDIIKEETGLHLYSIGDVEMILNNDDDTKDDTPSTPTHNRQEVYSPIHDTPSLYGNVLASGKPANLVTPFSKRTDRFAVKFSINTIPDVENGKQELNRDNEEDDEFSIVSKVVNRKRCSLVIHGSGPKPGCRFMYDRTEDRINAIESRIKKHARALVASGLYEEPTDPTIASPRSFFSVGMICCDGEGRLNEKSVMLQSSIEHSGGECVRLDLQRLSHFSVFPGQVVGIGGHNPSGHCLVASKLVDDIPTSVANEDLNPSKKQAMDKENQPTELLCNPRELSMIIAAGPFTTTDNLLFEPLVELLAYAKRRPPQLLVLLGPFIDSEHPDIKKGTVDRDFDEIFRFEVLKKLEDYVESMGSTVRVLLVPSIRDANHDFVFPQPAFDISQLQIASLTNPGIFEANEVKVGCCTLDVLKQISGEEISRIAADGKPIDRLSRIANHILNQQSFYPLYPPAESVPLDFSLAPEALQLSLVPDVLILPSDIKYFVKVLNNESEVTNCKKCIAVNPGRLAKGEGGGTFVELDYSGGPDKINASILAI 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02657 615 PIRSF DNA_pol_alpha_2 1 608 IPR016722 -
Tsu07g02657 615 Coils Coil 210 230 - -
Tsu07g02657 615 Gene3D - 506 611 - -
Tsu07g02657 615 Gene3D - 337 498 - -
Tsu07g02657 615 Pfam DNA polymerase alpha/epsilon subunit B 359 565 IPR007185 GO:0003677|GO:0006260
Tsu07g02657 615 Gene3D - 1 68 IPR043034 -
Tsu07g02657 615 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 609 IPR016722 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02657 3 615 Core DNA Replication Machinery Family AT1G67630 59.615 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02657 K02321 - gmx:100795306 956.822