Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02615 ATGGCGGCTAGCAGAAAAGGGAGTATAAGTTTAGAAGGAAAGAAAGTTATATTGGTCCCTTACATGGAACCTCACGTTCCCAAATATCACCAATGGATGCAAAACCCTTCTCTCCTTCAAGCCACTGCTTCCGAACCTCTTTCTCTCGAGCAAGAGTATCAGATGCAACTTTCCTGGTCACGTGATCTTAACAAGGAGACATTCATTGTATTGGATAAAGATTTGCTTCTTGAAATTGAAACCTTCTCTCATGGTCAACCCTATGTCCAAGCTATGGTCGGTGATGTTAATATTTTCATGAATGACATCAATAATCCTCAAATTGCAGAGATTGAAATTATGATAGCTGAACAAACCAGCCGTGGCAAAGGACTTGGAAAGGAGTCTGTTCTGATGATGATGGCCTTTGCTATTGAgaagttggggatcaaaaccTTTCAAGTTAAAATTGGAGAATTAAATGTAGAGTCCATCAACCTGTTCAAAAAACTGGGGTTTGTGCAAACTTCACATAGCAACATTTTCAATGAGgtGACTTTGGAGTTGCAAATAACAGAAGCCAGGAGTGAGGAGATGCTTGtggtgcgtacaagaggGAGAGACGGTAGAATTAGACATGCCGGCGTCGGACGAGGAGTTTCTATGCTTGTTGAGCAGGAACAGGATATTGAGCAGCCTGTGATTGTCGAGCAGGAGGATGAGGATGTTGCGCAGCATGGCTGGCCTGGAGGACCGCTTGATACAAGTCTTCTGACGCGCTACTCAGACCATGTTgctcgttatatatggtttggcaAGgaaCGTATTGAAGGAGCGAAACCTGAGTTACGTATAGCATCTCTTGGTTCCAAGCTTACTGGTTGGGTTCCTGGTCCTGGTCAACATCACCCAAATATTCAAGGCTGGTTGGATGAATCTGGGTTGAAATGGCTTGAGCGGACTAGTTTAAGTAAGGTGGATCCGCAGATTTTATCAGCCTTAACTGAGAGGTGGCATCCAGAGACATCGTCATTTCACATGCCGTTTGGCTGGTTGGATGAATCTGGGTTGAAATGGCTTGAGCGGACTAGTTTAAGTAAGGTGGATCCGCAGATTTTATCAGCCTTAACTGAGAGGTGGCATCCAGAGACATCATCATTTCACATGCCGTTTGGTGAAATGACGATTACACTTGATGATGTGGTGTGTCTGTTACATATACCTGTTAGAGGTATATTTTACACGCCTGTACCGGTTTTCATGGAAGAAGCTGCGGCACTTGCAACTGAGTTGTTGGGAGTCCCGTATGAGGAGGCATATTTGGAGACATCACGACAGAGGGGAGGAACTTTTACACAACAGTGGATATATGATTGTTGGCAGAGGAATCTACATATGTACCACAGATATGATTGTGCTGCCAGGgcgtatttgttgttgttggttggatGTACCATTCTAACTGATATGAGTTACACACGAGTCAACGCAAAATGGTTACCCATGTTTAGAGATTTGTCCACATTGAATAGATTTTCATGGGCTAGTGCTGCGTTGGTTTGTTTATATTATAATCTGAATGATGCATCCATGTTTACCACACATGCTCTTGCAGGGTATCCGACACTTCTACAGGTAACACCTGTTCCACAGTTTGTGCCTGCATATGCACCACCAGAAGCAGATCCAATACCACAAGATGCACCAGCACAAGATGCACCACCAGCACATGCACCACCATCTGGTGAACATAGATAG 1737 0.4191 MAASRKGSISLEGKKVILVPYMEPHVPKYHQWMQNPSLLQATASEPLSLEQEYQMQLSWSRDLNKETFIVLDKDLLLEIETFSHGQPYVQAMVGDVNIFMNDINNPQIAEIEIMIAEQTSRGKGLGKESVLMMMAFAIEKLGIKTFQVKIGELNVESINLFKKLGFVQTSHSNIFNEVTLELQITEARSEEMLVVRTRGRDGRIRHAGVGRGVSMLVEQEQDIEQPVIVEQEDEDVAQHGWPGGPLDTSLLTRYSDHVARYIWFGKERIEGAKPELRIASLGSKLTGWVPGPGQHHPNIQGWLDESGLKWLERTSLSKVDPQILSALTERWHPETSSFHMPFGWLDESGLKWLERTSLSKVDPQILSALTERWHPETSSFHMPFGEMTITLDDVVCLLHIPVRGIFYTPVPVFMEEAAALATELLGVPYEEAYLETSRQRGGTFTQQWIYDCWQRNLHMYHRYDCAARAYLLLLVGCTILTDMSYTRVNAKWLPMFRDLSTLNRFSWASAALVCLYYNLNDASMFTTHALAGYPTLLQVTPVPQFVPAYAPPEADPIPQDAPAQDAPPAHAPPSGEHR 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02615 578 Gene3D - 6 176 - -
Tsu07g02615 578 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 47 185 IPR000182 GO:0016407
Tsu07g02615 578 Pfam Plant mobile domain 355 539 IPR019557 -
Tsu07g02615 578 MobiDBLite consensus disorder prediction 550 569 - -
Tsu07g02615 578 Pfam Acetyltransferase (GNAT) domain 16 166 IPR000182 GO:0016407
Tsu07g02615 578 PANTHER N-ACETYLTRANSFERASE 9 8 194 IPR039135 GO:0008080
Tsu07g02615 578 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 10 169 IPR016181 -
Tsu07g02615 578 MobiDBLite consensus disorder prediction 550 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02615 Tsu-Chr7 30340198 30345791 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Tsu07g02615 PMD 6.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02615 K25762 - gmx:100817900 271.937