Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02596 ATGACCATATTAGGAACAATGTGTGTTAGGGAACAAAGTGAAATAGAACAAAGGTTACTTCAAGAAGAGTttgaatcttcatcttcaagTTTAGGAGAAGAACATGAAGATGCTTTCACAAAAGCTAGTATATGGAGCATCCTTACATTCATGTGGTTGAATCCTGTTTTTAAAACTGGTCAGGTTCGGAAGCTTGAACATGTTGACGTTCCTTCTATTCCTCATAGTGAAACTTCTGTTATTGCTTCATCTATGTTGGAAGAATCTATTGGAAAACAAAAACTTAGAGGTGGTTCCTTGATAAAAGCTATTATCCTTCCTATTTGGAAATCTCTGGCCTTCAATGCATGTTTAGCAGGTGTTAATACTATTGCATCCTATGTTGGTCCATTGTTGATatcaaaatttgtaaaaaatttgTTATCCAACAATGTTAGTTCAACAAACCAATATGGATTGATTCTAGCCTCAACTCTGTTCCTCTCAAAAATGGTGGAGTCGGTGACTCAGAGACAATGGTCCTTTGGTGCTCAAAGAATCGGAATTCGAGTCCGTGCAGGTCTAATGGCTCACGTTTATAGCAAGTGTTTAATGGTCAAGTGTGGTGGACCTGGTAACATCACCAATATGATTAACGTGGATGTCGAAAGAGTTGGAGACTTTTTCAATCACATTCATGGACTTTGGGTGATTCCACTTCAGACAATTTTAGCCTTGGCCATCCTATGCATAAATCTCGGTTGGATACCTTCCCTTGCTGCCTTCTCTGTCACAACTTTGGTCATGGTGTGTAACACACCTTTGGCAACCATGCAACAAGGTTTAACCTCCAAGATTATGGATGCAACTGATGCACGGTTGAAAATGACATCAGAGACCATTGAGAACATGCAGATTTTGAAGTTGCACTCCTGGGAGTTAATATTTATGCAAAAACTCCTCCAACTAAGGGACACTGAAATGAGCTGGGTTCTGAAATACTTCCATGCATGTTCAGCAGTAGCCACCCTTTTCTGGACAACTCCGACTTTGGTTTCTGTTATCACATTTGGGGCATGTATATTGGTGAAGACTGAGCTTACTTCAGCCACAGTCCTCTCAGCTCTTGCGACATTTCGCATTCTACAAGAACCAATTTACAATATGCCCGATCTTATATCCAAGATTAATCAAACCAAAGTATCAGTTGATCGAATCCACAAGTTAATACAAGTAGAAGATCAAAATCAATCCAGTAATAGGTATGCTTTCGATTCTTCAACAATATCAATTGAAATTAAGCCAGCAAACTATGCATGGGAAGCTAATGATCACACAACCACCAAGAGACCAACAATTACAATTACAGATTCATTTATGATAAAGAAAGGTCAAAAGGTAGCAGTTTGTGGGTCAGTGGGGTCCGGAAAATCAAGTTTGCTTCTCAGTATGCTTGGTGAGATTCCACTGGTTTCTGGGGAAGCAGCCCAAGTGTATGGTACCAGAAGCTATGTGCCTCAGAGTCCATGGATCCAATCGGGAACTGTGAGGGAAAACATACTCTTTGGAAAGAAAATGGATAAATTCTTGTATGAAAATGTCCTGGATAACTGTGCATTGCAACAGGATATCAGAATATGGAGTCCATGCGGAGATTTGACCCATGTGGAGGAGAGGGGCATCAACTTAAGTGGAGGGCAGAAACAACGGATTCAACTGGCAAGGGCGGTTTACAACAACTCAGATATTTATTTCCTTGACGATCCTTTTAGTGCTGTTGATGCTCATACCGGAAGTCATTTGTTTAAGGAATGTCTTCTGAAAATGTTGTCTGATAAAACAGTTGTTTATGCCACACATCAGATGCAATTCTTGGAAGCTGCGGATGTTATTTTGGTTATGAAAGACGGACAAATAGTGGAGTCGGGAAGCTATATAGATCTCATAGCATGCCCTGATAGCAGACTTTACCAACTAATGGCAGATCATAAAGAAACATTAAAACAAATTCAATCCcaagaagaagatgattctGTTAGCTGCAGCAGAAGACCTTGCtcaaaaaatccaattgaaaTTGCTGTAGAGAATAGTCAAAATATCACCATGGATGATGAGAAGAGAACCAGAGAAGAGGAAGCAATGACCGGTCGAGTAAAATGGAGTGTTTACTCGACCTTTGTTACATTGGCTTACAGCGGAGCACTTGTTCCGGTTATTCTCCTCTGTCAAATCTTCTTTCAAGTTATGCAGATGAGCAGCAGCTATTGGATATCTTGGGCTGCAGAACAAAGCGGAAGGGTCAACAATGTACGTCTTATAGTAATATTTTCCCTGCTTTCTGGTGGCAGTTCGATCTTCATGCTGGGAAGGACTGTTTTGATGACTATAGTTTCGGCAGAGACAGCTAGGCGCCTTTACCTTGGAATGACCACGTCAGTTTTCAGGGCACCTATTTCTTTCTTTGATAAAACACCATCAAGCCGAATCCTGAGTAGGTCATCGACGGACCAAAAGAGGGCAGACATTGACATCCCATACAGATTAGCTGGACTAGTCTTTGCATTTATCCAGTTATTTTGTGTCATTTCACTAATGTGTCTGGCCGCATGGCAGGTCCTTCCTCTCATTGTTGTGGTTTTTGGTATCTCCATCTGGTATCTGGCTTATTACAGCACTACAGCCAGGGAATTGGCCAGGATGGCAGGGATTCGAATGACGCCAATCTTGCATCACTTCACAGAATCAATTTCTGGGGCCACTACAATCCGATGTTTCGATCAAGAGAAAACATTCTTGACCAAAGCTATGTATTTAATTGATGACTATTCTCGTGTAGCCTTTCACAACCATGCCACCATGGAATGGGTGTCAGTCagaattaattttcttttcaatttggtCTACTATGTTGTTCTCGTCATCTTAGTTACTTTGCCAAGGTCTTCCATCGATCCCAGTCTGGCAGGTCTTATAGCTACTTATGGTTTGAGCCTGAATGTGCTTCAAGCTTGGGTGATATGGAACCTTTGTAACGTTGAAAACAAGATGGTATCAATAGAGAGAATATTACAATTTTCTACTATACCATCTGAAGCACCAATAGTTATTGAAGATTGTAGGCCTGCACCAGAGTGGCCTAGCAACGGAAAAATCGAACTCCACAACCTACATATACAGTATCATCCTGGTGCTCCCATGGTTCTCAAAGGTGTCACTTGTGTCTTCCAAGGACATAACAAAATTGGAGTAGTAGGCAGGACAGGGAGTGGAAAATCTACTCTGGTGCAAGCTCTCTTTCGGGTGGTGGAGCCTATAGAAGGATGCATTATGATTGATGGTATAAATATTTCCAATATTGGTCTGCATGACTTAAGGTCCAGACTTGGAATAATTCCTCAAGAGCCGACCTTGTTTTTAGGCACCGTAAGGACTAACTTGGATCCTTTGGAAGAACAAACAGATGAAGAACTTTGGGAGGTTCTCCGCAAGTGCCATCTCGCTGAAATAGTACACCAAGATCCAAGGCTTCTTGATGCACCAgTGGCTGAGAATGGAGAAAATTGGAGCCTTGGACAGAGACAACTAGTTTGCCTTGCTAGGCTGTTGCTGAAGAACAGAAGAATTTTAGTCCTAGACGAGGCAACTGCATCCATAGACACTGCAACTGATAGTTTAATTCAGAAAACTATTAGGGAAGAAACGAGTGGATGCACCGTCATTACAGTAGCACACAGAATTCCTACAGTCATTGATAATGATATGGTTTTAGTCCTCAATGAAGGTAGAATTTTGGAGTATGATAACCCAGCTCGATTGCTACGGGACCAATCTTCTTCGTTCTCAAAGTTGGTGTCAGAATTTTCAAGGAGATCATCCTCATTCCAAAGTTAA 3873 0.4049 MTILGTMCVREQSEIEQRLLQEEFESSSSSLGEEHEDAFTKASIWSILTFMWLNPVFKTGQVRKLEHVDVPSIPHSETSVIASSMLEESIGKQKLRGGSLIKAIILPIWKSLAFNACLAGVNTIASYVGPLLISKFVKNLLSNNVSSTNQYGLILASTLFLSKMVESVTQRQWSFGAQRIGIRVRAGLMAHVYSKCLMVKCGGPGNITNMINVDVERVGDFFNHIHGLWVIPLQTILALAILCINLGWIPSLAAFSVTTLVMVCNTPLATMQQGLTSKIMDATDARLKMTSETIENMQILKLHSWELIFMQKLLQLRDTEMSWVLKYFHACSAVATLFWTTPTLVSVITFGACILVKTELTSATVLSALATFRILQEPIYNMPDLISKINQTKVSVDRIHKLIQVEDQNQSSNRYAFDSSTISIEIKPANYAWEANDHTTTKRPTITITDSFMIKKGQKVAVCGSVGSGKSSLLLSMLGEIPLVSGEAAQVYGTRSYVPQSPWIQSGTVRENILFGKKMDKFLYENVLDNCALQQDIRIWSPCGDLTHVEERGINLSGGQKQRIQLARAVYNNSDIYFLDDPFSAVDAHTGSHLFKECLLKMLSDKTVVYATHQMQFLEAADVILVMKDGQIVESGSYIDLIACPDSRLYQLMADHKETLKQIQSQEEDDSVSCSRRPCSKNPIEIAVENSQNITMDDEKRTREEEAMTGRVKWSVYSTFVTLAYSGALVPVILLCQIFFQVMQMSSSYWISWAAEQSGRVNNVRLIVIFSLLSGGSSIFMLGRTVLMTIVSAETARRLYLGMTTSVFRAPISFFDKTPSSRILSRSSTDQKRADIDIPYRLAGLVFAFIQLFCVISLMCLAAWQVLPLIVVVFGISIWYLAYYSTTARELARMAGIRMTPILHHFTESISGATTIRCFDQEKTFLTKAMYLIDDYSRVAFHNHATMEWVSVRINFLFNLVYYVVLVILVTLPRSSIDPSLAGLIATYGLSLNVLQAWVIWNLCNVENKMVSIERILQFSTIPSEAPIVIEDCRPAPEWPSNGKIELHNLHIQYHPGAPMVLKGVTCVFQGHNKIGVVGRTGSGKSTLVQALFRVVEPIEGCIMIDGINISNIGLHDLRSRLGIIPQEPTLFLGTVRTNLDPLEEQTDEELWEVLRKCHLAEIVHQDPRLLDAPVAENGENWSLGQRQLVCLARLLLKNRRILVLDEATASIDTATDSLIQKTIREETSGCTVITVAHRIPTVIDNDMVLVLNEGRILEYDNPARLLRDQSSSFSKLVSEFSRRSSSFQS 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02596 1290 CDD ABCC_MRP_domain1 424 631 - -
Tsu07g02596 1290 Gene3D ABC transporter type 1, transmembrane domain 86 414 IPR036640 GO:0005524|GO:0016021
Tsu07g02596 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 422 644 IPR027417 -
Tsu07g02596 1290 Gene3D - 1028 1280 IPR027417 -
Tsu07g02596 1290 Gene3D - 445 680 IPR027417 -
Tsu07g02596 1290 SMART AAA_5 1071 1264 IPR003593 -
Tsu07g02596 1290 SMART AAA_5 456 631 IPR003593 -
Tsu07g02596 1290 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 426 654 IPR003439 GO:0005524
Tsu07g02596 1290 Pfam ABC transporter transmembrane region 734 975 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu07g02596 1290 Pfam ABC transporter transmembrane region 117 378 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu07g02596 1290 CDD ABCC_MRP_domain2 1043 1263 - -
Tsu07g02596 1290 CDD ABC_6TM_ABCC_D1 114 399 IPR044746 GO:0140359
Tsu07g02596 1290 Pfam ABC transporter 1062 1210 IPR003439 GO:0005524
Tsu07g02596 1290 PANTHER OS01G0902100 PROTEIN 29 1287 - -
Tsu07g02596 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1037 1270 IPR027417 -
Tsu07g02596 1290 Pfam ABC transporter 451 583 IPR003439 GO:0005524
Tsu07g02596 1290 Gene3D ABC transporter type 1, transmembrane domain 693 1026 IPR036640 GO:0005524|GO:0016021
Tsu07g02596 1290 SUPERFAMILY ABC transporter transmembrane region 101 406 IPR036640 GO:0005524|GO:0016021
Tsu07g02596 1290 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1045 1279 IPR003439 GO:0005524
Tsu07g02596 1290 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 29 1287 - -
Tsu07g02596 1290 CDD ABC_6TM_ABCC_D2 730 1020 IPR044726 GO:0140359
Tsu07g02596 1290 ProSitePatterns ABC transporters family signature. 556 570 IPR017871 GO:0005524
Tsu07g02596 1290 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 732 1008 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu07g02596 1290 SUPERFAMILY ABC transporter transmembrane region 732 1025 IPR036640 GO:0005524|GO:0016021
Tsu07g02596 1290 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 116 391 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02596 Tsu-Chr7 30033327 30039004 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02596 408 680 Calmodulin-binding Proteins AT2G36910 27.931 1.53e-21 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02596 - - gmx:100809063 1798.48