Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02594 ATGAGAGGAAGAAGCTACACTCCATCGCCACCACCACCACGTTACGGCAGAAGAGGCGGTGGAAGAAGTCCAAGTCCTCGTCGCCGTTACGCTCCCCGTCAAAGCGATCTACCTACAAGTCTTCTTGTTCGTAACCTTCGCCATGATTGTAGACCTGAAGATCTTCGTAGACCTTTTGGTCAATTTGGTCCTCTTAAGGACATTTATCTCCCTAAAGATTATTACACTGGACAGCCGCGTGGATTTGGTTTTATCCAATTTGTGGATCCTGCTGATGCTGCCGATGCTAAATATCATATGGATGGTCAACTTCTTCTTGGTAGGGAGCTGACTGTTGTTTTTGCCGAGGAAAATAGAAAGAAGCCAACTGAGATGAGGGTCAGAGAGAGAAGTGGTCGGTATTCTGATAGAAGGAGGTCTCCCCCACGCTACTCTCGTTCTCCCCGCTATTCCCGCTCTCCACCACCTCGTCACAGATCTCGCTCTCGCGGAAGTCGTGACTATTATTCCCCTCCTAAACGAAGGGAATATTCAAGATCTCTATCACCCGAGGATAGAAGACACAGTCGAGAAAGATCACAGCATAGCAGAGAGAGGTCATACTCACGCTCTCCACCCAAAAATGGGGATGTGAGAAGCCGTAGTCAGAGTCCAGCGAAAGACCCAGTAGAGAGCAGGAGCCCAACTCCGAACCGCGATGTAAGGGAATCACCCCGCAGTAGGTCTCCCAGTCAGTGA 738 0.4986 MRGRSYTPSPPPPRYGRRGGGRSPSPRRRYAPRQSDLPTSLLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGQPRGFGFIQFVDPADAADAKYHMDGQLLLGRELTVVFAEENRKKPTEMRVRERSGRYSDRRRSPPRYSRSPRYSRSPPPRHRSRSRGSRDYYSPPKRREYSRSLSPEDRRHSRERSQHSRERSYSRSPPKNGDVRSRSQSPAKDPVESRSPTPNRDVRESPRSRSPSQ 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02594 245 MobiDBLite consensus disorder prediction 119 245 - -
Tsu07g02594 245 MobiDBLite consensus disorder prediction 1 37 - -
Tsu07g02594 245 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 117 IPR000504 GO:0003723
Tsu07g02594 245 PANTHER SERINE/ARGININE-RICH SC35-LIKE SPLICING FACTOR SCL33 1 230 - -
Tsu07g02594 245 MobiDBLite consensus disorder prediction 206 224 - -
Tsu07g02594 245 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 1 230 - -
Tsu07g02594 245 SMART rrm1_1 40 113 IPR000504 GO:0003723
Tsu07g02594 245 MobiDBLite consensus disorder prediction 119 143 - -
Tsu07g02594 245 Gene3D - 13 131 IPR012677 -
Tsu07g02594 245 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 110 IPR000504 GO:0003723
Tsu07g02594 245 MobiDBLite consensus disorder prediction 1 17 - -
Tsu07g02594 245 MobiDBLite consensus disorder prediction 160 205 - -
Tsu07g02594 245 SUPERFAMILY RNA-binding domain, RBD 7 127 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02594 Tsu-Chr7 29977657 29980142 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02594 39 156 Eukaryotic Initiation Factors Gene Family AT4G34110 27.966 6.92e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02594 K12900 - gmx:100775883 288.885