Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02585 ATGGGAGAAATACATAGTGAGGTAATATGGGAGAAGGAggaggaagaaaaagaagaagaagaacaagctCAAGTTGATATATGGAAGTACATATTTGGTTTTGTAGAACTTTCAGTGGTGAAATGTGCAATTCAACTTGGCATAGCTGATGCCattgaaaaacacaaaaaacccaTATCCCTAATAGAGTTATCAACAACTCTAAAATGTGACCCTTCATATCTTAACCGAATCATGAGATTCCTAGTACAtagaaaaatattcaaaaccaTACATAACAACCATGATACATATCCTAGTTATGTTCAAACACCACTTTCTCGCCGTTTGATTCGAAATGGCGAGAAAAGCATGACTGCTTTTCTTTTACTGGAGAGCAGTTCTGTAATGGTAGCACCTTGGCTTAGTTTAAGTGACCGTGTTTTGGTTAATGGTAATCCTTCTTTTGAGAAGGTTCATGGTGAAGATGTGTGGCGTTATGCTGCTTCAAATCTTGATCATAGTAATCTTATTAATGATGCTATGGCTTGTGATGCTAAAGTTATTGTGCCAGCAATTGTTGAAGGTTGTAGTGAGGTTTTTGATGGTCTTGGATCCTTGGTGGATGTCGGTGGAGGGAATGGTACCACCATGAGTATTCTTGCTAAGGCTTTTCCTTGGATTCATGGAATTAATTTTGATCTTCCACATGTCGTTGATGTGGCACCAAAGTATGATGGGGTGGAACATGTGGCTGGTGACATGTTTACGAGTGTTCCCAAAGCTGATGCTGTAATTATTAAGTGGGTTTTGCATGATTGGGGAGATGATGAGTGCATCAAAATCTTGAAGATATGTAGGGAAGCTAttccaaaagaaaaaggaaaagttaTTATTGTGGAAGCAGTTattgaagaagaaggagaaggaaaACACAACAACTACAAAGATGTAGGGTTAATGTTAGATATGGTGATGATGGCACATACTAATATTGGCAAAGAAAGGACACTACAAGAATGGGACTATGTTATCAAAATGGCTGGATTCAAGGCACTCACTGTGAAATATATTAATGCTGTGCAATGTGTAATTTTAGCCTCGTGCtaa 1089 0.3462 MGEIHSEVIWEKEEEEKEEEEQAQVDIWKYIFGFVELSVVKCAIQLGIADAIEKHKKPISLIELSTTLKCDPSYLNRIMRFLVHRKIFKTIHNNHDTYPSYVQTPLSRRLIRNGEKSMTAFLLLESSSVMVAPWLSLSDRVLVNGNPSFEKVHGEDVWRYAASNLDHSNLINDAMACDAKVIVPAIVEGCSEVFDGLGSLVDVGGGNGTTMSILAKAFPWIHGINFDLPHVVDVAPKYDGVEHVAGDMFTSVPKADAVIIKWVLHDWGDDECIKILKICREAIPKEKGKVIIVEAVIEEEGEGKHNNYKDVGLMLDMVMMAHTNIGKERTLQEWDYVIKMAGFKALTVKYINAVQCVILASC 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02585 362 Pfam Dimerisation domain 39 83 IPR012967 GO:0046983
Tsu07g02585 362 Gene3D - 9 110 IPR036388 -
Tsu07g02585 362 Pfam O-methyltransferase domain 134 344 IPR001077 GO:0008171
Tsu07g02585 362 CDD AdoMet_MTases 200 293 - -
Tsu07g02585 362 PANTHER O-METHYLTRANSFERASE 13 359 IPR016461 GO:0008168
Tsu07g02585 362 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 13 359 - -
Tsu07g02585 362 SUPERFAMILY "Winged helix" DNA-binding domain 17 114 IPR036390 -
Tsu07g02585 362 Gene3D Vaccinia Virus protein VP39 112 360 IPR029063 -
Tsu07g02585 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 358 IPR029063 -
Tsu07g02585 362 PIRSF O-mtase 6 362 IPR016461 GO:0008168
Tsu07g02585 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 362 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02585 Tsu-Chr7 29872297 29875684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02585 40 348 Monolignol Biosynthesis Gene Families AT5G54160 35.535 1.38e-62 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02585 K22588 - gmx:100782951 456.447