Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02555 ATGAGTATAAATGCAAATTATTCTTTGTTCCATTCAATTACGAGATTGAATGAAACTGGGTATAAAGTTTGTTATGATGCTCCACCCCATATCGTTTCAGATGGTTTATGGGGTGGTCAAGAAAATGGAAGAACACCAATGAAATCTTTTTTGCCGGTGATTGAGTTACAATTGCTTATCATTTTTGTCATCACCCAAATATGCGGTTTGCTTCTCAAACCCTTGAGACTTCCTCTATTCATTCCACAAATGATGGCTGGGTTGATTATAGGATTTTTATTTGAGATAAAGCCATCGGAGCCATACATGACCATGTTGTTTCCATATGGAACACATGACATAATTTCAGCAATTTCATCAATTGGTTTTGTACTCTTTGTATTCATAAACGGTGTACAAATGGATTTCAGCATGATAACAAGGACAGGAACCAAGGCATGGACAATTTCAATATTAGGGTTAGTTATACCATTATCCATTGAATTAGCACCACTAGTATTATTCCCCGAAAAAGTACAAGCCATTGAAAAAGCAATTGGACATGGAATTTATGTGGCAATGATATCTCACAGTATAAGTTCATTTGCTGTAATTGCTTCATTCTTAAGTGAACTTCAAATCCAAAACTCTGAACTTGGTAGATTGGCTTTGTCCTCAGCTTTGGTTACTGACATAGTGAGAACAACCATTACAACCAATATTGTTGCTATTATGAGTCATCCTAATGTGGAAGTGATTTTAAGAAACTTGTTCTCACTTTTTGCACTTGCTATACTCATACCATTAGTATGTAGGCCAATCATGTTTTGGATCATTAAACATACACCAGAAGGAAGACCTGTGAAAGATGGTTATATTTATATCATCATTACAATGGTTTTTGGTTTAGGTGTTTTATCGGTTAATATAGATCAAGAATTTATCTTAGGAGCTTTCATTTTGGGACTATCTGTTCCCGAAGGACCTCCTTTAGGATCAACATTAGTTAAGAAGCTCCAATTCTTTGGTCCAACATTCTTTCTACCTATCTTTGTGACTACCTCTGTGTTGAAAGCAGATTTTCCAACGCATATTTCATCGCTTGTTACGGTGTCTATGGGTTTGGTGATTCTTGCTACtcatttgatcaaaatatcaataTGTTTTATAACTGCCTTCTATTGCAAGATGCCTGTCACTGATGCTTTGTGTCTTGCTCTCATTTTGAACACCAAAGGTGTAGTCGAAGTCGGCGTCTACAATTCCTTATTCGACAATAATGTTATTGACGGGCAAGCATATGCAGTTATGATTATAAGTGTAATGATCATAGCAAGCATTGTGCATTGGTCAGTGAAGTTATTATACGATCCAGCAAGAAAATATGCTGGATACCAAAAAAGGAACATAAAGGGATTAAAAAGAAACTCTGATATAAGAATACTAATAACACTTCAAAAACATAACCATATTTCAGCAGCAATAGATTTCTTAGACCTATGTTGTCCAACGCATGAATCTCCAATCACAGTTGATGTACTTCATGTAATTGAGCTAGTTGGAAGAGCTTTGCCTGTTTTTATTCCTCATTGTCTTCAAAGACAAGCATTGGGATCTGCTTCGCATAAATCATACTCTGATGATATCATCCTTGCTTTCGATATCTACGAGCATGATAATGAAAATGCAGTATCAATAAACACTTACACAGCGATATCTCCAGCAAAACTCATGTTTGAAGATGTTTGTAATCTTGCATTGGACAAAGTTGCATCCATAATCATTCTTCCATTTCATATAAGGTGGTCTAGTGACGGTGTAGTTGAATCTGATGACAAAAAAGTTTTAAGAGCATTGAATCAAAGAGTCCTCGAAATAGCTCCCTGTTCTGTTGGAATTCTCGTAACTCGCGCTAATTCAATATCGAAAGCCACACcaacaacatcaataacatCAGAATATTCCACTATTCGATTGGCTGTAATTTATTTAGGTGGAAACAATGACGATGATGAGATTTTATGTTTAGTGAAACGTGCAATGAATAATCCTAGGATCAATATTGTTGTTTACCATCTTGTTGCTAAGGATTGCATAGCAGAATTGGAGGATTTAATGGTAGATGATCATGAGCTATTGCAGGAAgtaaaaaatggtgaaaatgtGAACTATCAAGAGATTTTCACAAAGGATGGATCACAGACAGCTTGTTTTCTACGTGAGATTGTCAATGAAcatgattattttattgttgGGAGAAGACATGGAATTCGTTCTCCTCAAACTGATGGATTATCAGAATGGAGTGAATTTCCTGAACTTGGTGCTATTGGTGATTTCCTTGCTGCACCTGATCTTAATAGTTGTGCATCTGTTATGGATTTCGCTTATAAAGATATGGAGGAGCAATTCATAATTAGAGTTCCACCGAATGTTGCCGAGAGGATAGAGCGTCTTCTGAATGAAAACAATGCTTCTTCATCGGAGGATAAGTCGCTAGATTTGCAATTTGGCGAGGATGGAAGAAGCGGCACGTTTGTAATTGGGGATGAGCACTTTCCAGCATCTCTATTGGATCTTCCTGCTGTGGTTGAATCATACAAGACTTATGATGATAACTCTTTGGTTAAGACTGCTGATATTGGTCAGATGATTATGGTGAGGGAATCTGGTGATGCTGCTCCAGATGTAATTGAGTCTAGACATGGCCTAACACCTCCAATGAGAGATGCCCGCAAGCGTAGATTCCGCAGAGAGCCTGACCTCAATCCTGAGCTTGTCTCCCATTCACATGTGGAAGTAGCTGAGCAAGAAGGGGAAGAGAATGCTCGAAGTGCTAATAAAAAACCTGCAGCTACACCTGCATCAAAACATGATGTTCCAGAGACTCGTACAAATGCTGGAGATGCTGACAGGAGCGATTCTGATGAATCTGATGAATCA 2922 0.3689 MSINANYSLFHSITRLNETGYKVCYDAPPHIVSDGLWGGQENGRTPMKSFLPVIELQLLIIFVITQICGLLLKPLRLPLFIPQMMAGLIIGFLFEIKPSEPYMTMLFPYGTHDIISAISSIGFVLFVFINGVQMDFSMITRTGTKAWTISILGLVIPLSIELAPLVLFPEKVQAIEKAIGHGIYVAMISHSISSFAVIASFLSELQIQNSELGRLALSSALVTDIVRTTITTNIVAIMSHPNVEVILRNLFSLFALAILIPLVCRPIMFWIIKHTPEGRPVKDGYIYIIITMVFGLGVLSVNIDQEFILGAFILGLSVPEGPPLGSTLVKKLQFFGPTFFLPIFVTTSVLKADFPTHISSLVTVSMGLVILATHLIKISICFITAFYCKMPVTDALCLALILNTKGVVEVGVYNSLFDNNVIDGQAYAVMIISVMIIASIVHWSVKLLYDPARKYAGYQKRNIKGLKRNSDIRILITLQKHNHISAAIDFLDLCCPTHESPITVDVLHVIELVGRALPVFIPHCLQRQALGSASHKSYSDDIILAFDIYEHDNENAVSINTYTAISPAKLMFEDVCNLALDKVASIIILPFHIRWSSDGVVESDDKKVLRALNQRVLEIAPCSVGILVTRANSISKATPTTSITSEYSTIRLAVIYLGGNNDDDEILCLVKRAMNNPRINIVVYHLVAKDCIAELEDLMVDDHELLQEVKNGENVNYQEIFTKDGSQTACFLREIVNEHDYFIVGRRHGIRSPQTDGLSEWSEFPELGAIGDFLAAPDLNSCASVMDFAYKDMEEQFIIRVPPNVAERIERLLNENNASSSEDKSLDLQFGEDGRSGTFVIGDEHFPASLLDLPAVVESYKTYDDNSLVKTADIGQMIMVRESGDAAPDVIESRHGLTPPMRDARKRRFRREPDLNPELVSHSHVEVAEQEGEENARSANKKPAATPASKHDVPETRTNAGDADRSDSDESDES 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02555 974 CDD TAF7 794 901 IPR006751 GO:0005669|GO:0006367
Tsu07g02555 974 Pfam TAFII55 protein conserved region 793 912 IPR006751 GO:0005669|GO:0006367
Tsu07g02555 974 MobiDBLite consensus disorder prediction 886 905 - -
Tsu07g02555 974 Gene3D - 54 456 IPR038770 -
Tsu07g02555 974 SMART TAFII55_N_2 793 938 IPR006751 GO:0005669|GO:0006367
Tsu07g02555 974 MobiDBLite consensus disorder prediction 911 938 - -
Tsu07g02555 974 PANTHER CATION/H + ANTIPORTER 12 786 - -
Tsu07g02555 974 Pfam Sodium/hydrogen exchanger family 59 441 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tsu07g02555 974 PANTHER CATION/H+ EXCHANGER 3 12 786 - -
Tsu07g02555 974 MobiDBLite consensus disorder prediction 911 974 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02555 Tsu-Chr7 29435077 29493419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02555 23 786 Antiporter Super Family AT3G44900 35.468 2.61e-145 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02555 - - cam:101512648 1211.44