LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu07g02545	ATGAGAATGTTACCGTTTTGCTCAGCCACACCGTGTTATTCTCCATCTTCTCAGataccttcatttggGGGATTTCAATCTCTATGTCCAATTCGAAAGGATTTTGAGAGTAAATGTGTTGCAGAAGAAAGTGTACATATAGGTTTGCATTATGGAACACCTTCACTTAGAAATTCATTTACAACACAAGCTATAAAGAATGTTTCAGGATGGGAAAATTCACCGGTGACGACAGATTGGCACCATTCAGTTAGTAATGGTGAATTTAGATATAGTTTATCGACTGTGCCGGAGGAGTTAGTAGACTTTGCAGGACAGTCAACTGAAGGATCTGATGCATTAGTAGTACCTGCGCAACCAGAAGCGATATTGAGTACTGATATATCGGGGAAGTTTGAATCTGTGTCTAGTTTGATTCAAGGGGGTAATGAATCGTTAGCCGCTACAAAAGAAAGCGTTGACGACCTTGTTTCTGGAGTAACTGAGTCATTCAATGCCGCTGTTAATAAGGGAGAAGATGTTTTACGAAGTTCGCTGGATACAGCTACTTCTTTTGTTGATTCCATAGTTAAAAATGCTACTACATCTGCAGATAATGCTTTTAGTAAGGTTTTTTCTTCTGTTGATCAAACGGGGGATTTAGCAAATAAGAAAATTAGTAGCTATTCTGGTGGGATAAATGGAGTCACGAGTAAGGCACCTGCTTTGGTTATTGATGTGTTGCGTCGCACAGTTGTTGTGGTAGAGAGTTCTTTATCGAAGGGGGCTTCCTATGTTGTTTACTTGTATGGATCAGCCAAGGAGGTTCTTCCTGCAGAGATTAGAGATTCGGTCAATGTATATGAAGAAAAGGCAACACAAATCTTAAGGCCTGTTGGGTCTGCAACTCAACAGATATTCACAGCTTTCTATTCATTGGAGAAGAGTCTTGGCTTGGATCCAAACGACCCAATTATtccatttgttgtttttgtcgGCTCTTCAGCAACATTGTGGGCTATTTATTGGTTGTGGAAATATGGAGGTTACTCAGGAGATTTATCCCCTAAATCAGCTTTTGAGCTCTTGTCTGGGGACTCAAATTCTGTACTTATAGATATCCGCTCGGAGGATTTGCGAGAAAAAGATGGTATTCCTGATATTCGACGGGGTGCTCGGTTTCGTTATGCAAGTGTAACTCCAATTGAGGTTGATGGCTCCATACGCAAGTTGTTGAAGGGTGGTAGAGACCTGGATGACTTTTTGGTTGCTGTTGTTATTCacaatttgaaaattgttaagGACAGTTCCAAGGTTATTGTGTTGGATGCTGATGGTAGTCGTTCTAAAGGCATTGCAAGGTCCTTGAAGAAAATTGGAATCAAGAATCCATACTTGGTCCAAGGTGGTTTTCAGTCTTGGACTAAACAAAGTCTCCGCATCAAGGAACTCAAACCTGAAACGGCATTTACCATACTTAACGAGGAAGCTGAAGCAATTCTAGAGGATATTAGACCTTCTCCTTGGCAACTTTTAGGTTATGGTACGGCACTACTTGCAGGGTCATATGGATTAGTAGAGTGGGAGAAAACATTGCAGTTTATTGGTGTTTTTGGCCTCGGTTTGACCTTATATTCGCGGGTTTCTTCATATGAAAGGTCAGAAGATTTGACGCAAGATGCGAGGCTATTGCTTGCTCCTGTTAAACTTGGAGGTCAGGCGTTTTCATGGGCTGCCGGAAAATTGGAATCAAATGGCATAGGGTTACCTACATCACCTTCATCTTTAGATGTTCAGAACCGGGTGTTACAGGCTGCTGccaaacatgaatcccaaccaTCTGATAGTGAAGGTAACCAAGACCCGAATCCTGAATCCACAGTTTCTCTCAATCAAAATGCATGA	1884	0.4007	MRMLPFCSATPCYSPSSQIPSFGGFQSLCPIRKDFESKCVAEESVHIGLHYGTPSLRNSFTTQAIKNVSGWENSPVTTDWHHSVSNGEFRYSLSTVPEELVDFAGQSTEGSDALVVPAQPEAILSTDISGKFESVSSLIQGGNESLAATKESVDDLVSGVTESFNAAVNKGEDVLRSSLDTATSFVDSIVKNATTSADNAFSKVFSSVDQTGDLANKKISSYSGGINGVTSKAPALVIDVLRRTVVVVESSLSKGASYVVYLYGSAKEVLPAEIRDSVNVYEEKATQILRPVGSATQQIFTAFYSLEKSLGLDPNDPIIPFVVFVGSSATLWAIYWLWKYGGYSGDLSPKSAFELLSGDSNSVLIDIRSEDLREKDGIPDIRRGARFRYASVTPIEVDGSIRKLLKGGRDLDDFLVAVVIHNLKIVKDSSKVIVLDADGSRSKGIARSLKKIGIKNPYLVQGGFQSWTKQSLRIKELKPETAFTILNEEAEAILEDIRPSPWQLLGYGTALLAGSYGLVEWEKTLQFIGVFGLGLTLYSRVSSYERSEDLTQDARLLLAPVKLGGQAFSWAAGKLESNGIGLPTSPSSLDVQNRVLQAAAKHESQPSDSEGNQDPNPESTVSLNQNA	627

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu07g02545	627	SUPERFAMILY	Rhodanese/Cell cycle control phosphatase	331	474	IPR036873	-
	Tsu07g02545	627	ProSiteProfiles	Rhodanese domain profile.	358	476	IPR001763	-
	Tsu07g02545	627	SMART	rhod_4	348	473	IPR001763	-
	Tsu07g02545	627	PANTHER	RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN	3	626	IPR044690	GO:0009704\|GO:0071277\|GO:0090333
	Tsu07g02545	627	PANTHER	RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN	3	626	-	-
	Tsu07g02545	627	Gene3D	-	343	481	IPR036873	-
	Tsu07g02545	627	MobiDBLite	consensus disorder prediction	597	627	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu07g02545	320	437	Sulfurtransferasese or Rhodanese	AT5G23060	29.365	4.82e-12	65.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu07g02545	-		-	mtr:MTR_3g084030	1009.21