Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02539 ATGGATAATGATAGAGATGCTAATGATGTTGAAATGAACAATGGTAATGATATGCAtaatgaggaagaagaagaggattTGGATGATTATACACCTATAGATCAATTCACAGATGATGATATAAGAGAGATGGAATTTGAATCAGAGCAAAAAGTTGTCGAGTTTTATGAAATGTATGCTGAATATCATGGGTTCGCTGTAAGAAAAGATTTTAAGGAATGTGATATTGAAGGGAATATTGTTAGGCGCCAATTAGTTTGTAATAGAAAAGGTCGTGTCAAATGCAAGCACGTCACCAAAACATTCAAAGTCAAATCGGCTAGTTCCATCTGA 333 0.3183 MDNDRDANDVEMNNGNDMHNEEEEEDLDDYTPIDQFTDDDIREMEFESEQKVVEFYEMYAEYHGFAVRKDFKECDIEGNIVRRQLVCNRKGRVKCKHVTKTFKVKSASSI 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02539 110 MobiDBLite consensus disorder prediction 18 33 - -
Tsu07g02539 110 MobiDBLite consensus disorder prediction 1 17 - -
Tsu07g02539 110 MobiDBLite consensus disorder prediction 1 33 - -
Tsu07g02539 110 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 10 99 - -
Tsu07g02539 110 Pfam FAR1 DNA-binding domain 54 103 IPR004330 -
Tsu07g02539 110 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02539 Tsu-Chr7 29169780 29170309 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu07g02539 FAR1 5.3e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02539 - K17604 mtr:MTR_3g080590 95.1301