Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02533 ATGTTTCAACCACCACCAACCAACATTGAGGAGTCTCTTAACGCTGAATCAGAATCAGCAATTGGGTCTACTACTAATTCTCAAGGGCCAGTGTTGTCCACTCAGGTTGGTCTAGAAAATATTACTTTTAATGAAGGAGAACATTCAATTGTGGGAGTTGACCAAAAAGCATATAACTTTTGGGGTAGAATCAAAGATGGCTATAACAACAATCGCGAACAACTTATACTGAGGGAGTGGTCTACACTCAAATCTCGATGGCATCTATTGAATAAACATTGCCAATGGTTTTGCGGCAGCTATAAACTAGCCGTTGCTAACAAGAAAAGTGGGCAATCTGAGACCGACGTCATGGATGAGGCACGTAAACTTTTTAATCAAGTACATGAACAACGTTTCACAATGGAGCACGCGTGGAGGTTGTTGAAGGATGAACCTAAATGGAAGGGACAAGAAATGAACAATTCTTCAAAGAGATCAAGGACATCCTCTGTTGGGATGTATTCATCAACATCTAATCCGAAAAATCCCATCGATTGTTCAGAATACAATAATGCAACTCAGACTGAGCGCCCAATGGGACAAAAGGCGGCAAAAAGGAAGGGAAAAGCATCTTCATCTACAACACCGATAGTTGATTTGACTGGTATGGAAAATGTCTCGGAAAAGAAATTAGTTGTGTATGGTAAAATCGCTGAAGCAAGGTTGGCTGAGAGCATACCGATGTTGTATGAAATTCTCATGAAAGACAAATCAACGATGGATGATGAGCAACGTCGAGAGCATGAAGAAATTTGTCAAAATGATTGCCTCAACGACAACACTGAGGAAAAGGTAATAAGGTTAGTACGTGAAGCGCAACAACAAGCCAACAATACTAGTAGGCGTAGAAAAAGAAGAACGGTGATAGATCGAAGTCGTGAAGAAGGGCATAATCGATTGTTCAATGACTACTTCTCAGAAAATCTTGTATACACAGAAGCTCAGTTCAGACAAAGGTTCCGTATGCGAAGACATGTGTTCCTTCGCATTGTTGAAGCTCTTGGAAATCATGAAGAGTACTTTCAAAGAAGGATTGATGCAGTGGGTAAAATGGGACTTTCACCATTGCAGAAGTGCACTGCTGCTCTTCGTATTTTAGCATATGGATCACCAGCTGACATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGATGACTACGTTCGCATTGGTGAAAGCACGACATTGGAGTGCTTAGAAGGTATGTTGGGTTCAATAGATTGTATGCACTGGGAATGGAAAAATTGTCCTATCGCATGGAAAGGTCAATTTTCTAGAGGTGATCATGGTAAACCCACAATCATGCTTGAAGTTGTGGCATCTCAAGACTTGTGGATTTGGCATGCATATTTTGGCACCGCGGGTTCTAACAACGACATTAATGTGTTAAACACGTCTGATGTGTTTAACGATGTTTTGAATGGAAAAGCTCCTGCTGTGCAATACACGGTGAATCGGACCACATATCATATGGGGTACTACCTAGCAGATGACATTTATCCTGAGTGGGCAACATTTGTCAAGACCATCCCTATGCCGCAAGGAGAAAAGAGAAAGCTATTTGCCCAACGACAAGAATCGGTACGGAAGGACGTTGAACGGGCATTTGGAGTGCTCCAAGCCAGATTCGCTATTGTACGTGGTCCGACGCGTGCTTGGCATATGAATACAATGAAACACATAATGTTAGCGTGTATCATATTGCATAACATGATTGTCGAAGATGAGCGAGACACATATGCTGGTAATTTTGATTATGACCACATTGATAATAATTTCTCCACAACTGAAGTATCTGCCGGTCCTGATCCCAATTTGACAACATTGTTTGAAAGGATGGCACATGTTCATCAAAGGCAAAACCATCGTCAACTACAAGCAGACTTGGTGGAGCATATTTGGGAGAAATTTGGTCATGAGAATAACGAAAGTTAA 2070 0.3903 MFQPPPTNIEESLNAESESAIGSTTNSQGPVLSTQVGLENITFNEGEHSIVGVDQKAYNFWGRIKDGYNNNREQLILREWSTLKSRWHLLNKHCQWFCGSYKLAVANKKSGQSETDVMDEARKLFNQVHEQRFTMEHAWRLLKDEPKWKGQEMNNSSKRSRTSSVGMYSSTSNPKNPIDCSEYNNATQTERPMGQKAAKRKGKASSSTTPIVDLTGMENVSEKKLVVYGKIAEARLAESIPMLYEILMKDKSTMDDEQRREHEEICQNDCLNDNTEEKVIRLVREAQQQANNTSRRRKRRTVIDRSREEGHNRLFNDYFSENLVYTEAQFRQRFRMRRHVFLRIVEALGNHEEYFQRRIDAVGKMGLSPLQKCTAALRILAYGSPADIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDYVRIGESTTLECLEGMLGSIDCMHWEWKNCPIAWKGQFSRGDHGKPTIMLEVVASQDLWIWHAYFGTAGSNNDINVLNTSDVFNDVLNGKAPAVQYTVNRTTYHMGYYLADDIYPEWATFVKTIPMPQGEKRKLFAQRQESVRKDVERAFGVLQARFAIVRGPTRAWHMNTMKHIMLACIILHNMIVEDERDTYAGNFDYDHIDNNFSTTEVSAGPDPNLTTLFERMAHVHQRQNHRQLQADLVEHIWEKFGHENNES 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02533 689 Coils Coil 272 292 - -
Tsu07g02533 689 MobiDBLite consensus disorder prediction 150 210 - -
Tsu07g02533 689 Coils Coil 430 431 - -
Tsu07g02533 689 PANTHER OS06G0597250 PROTEIN 257 684 - -
Tsu07g02533 689 Coils Coil 388 388 - -
Tsu07g02533 689 Pfam Plant transposon protein 433 625 IPR006912 -
Tsu07g02533 689 Pfam No apical meristem-associated C-terminal domain 132 259 IPR029466 -
Tsu07g02533 689 PANTHER UNCHARACTERIZED 257 684 IPR045249 -
Tsu07g02533 689 MobiDBLite consensus disorder prediction 1 28 - -
Tsu07g02533 689 MobiDBLite consensus disorder prediction 155 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02533 Tsu-Chr7 29089545 29092232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02533 50 209 Glutathione S-transferase Gene Family AT5G41240 33.728 7.93e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02533 - - ccaj:109812481 517.309