Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02529 ATGGAGGGTTCGACAACGGGGTCAGGCGGCGGCGGTGGtggtagtggtggtggtggtccAGCACCGTTCCTAGTGAAAACGTATGAGATGGTTGATGATTCGTGCACAGATGAGATAGTATCTTGGAGTGAAAACAACAACAGTTTCATCGTATGGAATCCAACTGAATTTGCTAGTCTTCTTCTTCGTAATTATTTCAAACACAATAATTTCTCCAGCTTCATTCGTCAGCTTAATACTTATGGATTTCGAAAAATACATCATGAGCAATGGGAGTTTGCTAATGCATATTTTGTGAAAGGTCAAAAGCATCTTCTTAACAACATTCACCGTAAGAAACCAATTCACAGTCACAATTCACAAGGCTCTCATGGAGATCCAGAAAGGTTAGCATTTGAGGAAGAAATAGAGAAACTTTCGAACGAGAAAACTACTATTCAATCCAATATTTCAAACTTCAAGCAGAATATATCAACCGCAAAGCTTCATTTGGAAGAACTGCAACAACGATTAGACGGCATGGAGAAGAGGCAGAAAAACCTGTTGAACTTGTTTGAAAGGGAACTTCAGAATCCTAAATTTGTTGagcaaatttatcaaaaaatcgAGTCTTTAAATTTATCAGGACACAATAAGAAGAGACGAATTCCTCATGTTGAAAAGAGTTTTGTTGACAATGATAGCAATTTTGGAATAATGGAAGTCGGAAATATGAATATTTTCCGTGAAGATTTCTGCAGTAAACTCAACCTGTTATCAACTACTAGTTCAAATGAAGATGGAGAAAGCACACATAATAAGATATTGTGCGAAGGAGAATTACCGAAAGAAATACTTGGATTTGCATCTGGCAAAGAAGGTCATTCGCTCTCATGCTCTCCTTCAGTCAATCCTATCTCAGAGCATACCGATAATGGAGCATGCTTCACTTTTGATATGGATTCATGCTTATTACAAAGTGGAAAATTGAACTCCTTGGAACCAAAAACCGGAGAAAGTGATTGTGATCAAATATGCTGTATTTTAAGTCTAACTTTGACATCCTCTCCGGCACAAGATATATCACCACAAATAGACGGTCAAGAAATCCGTAAATCAGTTGAATCAAGTTTTCATACCAATGAGCATAAAGAATGTGATTTTGGAGCTTTTTCAAACAAGAATTTGGATAATGTGGTTACAAatttagcttcctcaatagagTCTCCTAGTAACGACCAAGCGATCATAGCTGCTCCGGTTAAAGACAGAGTGAACGATCTGTTTTGGTCACAGTACCTTACAGAATGA 1290 0.3597 MEGSTTGSGGGGGGSGGGGPAPFLVKTYEMVDDSCTDEIVSWSENNNSFIVWNPTEFASLLLRNYFKHNNFSSFIRQLNTYGFRKIHHEQWEFANAYFVKGQKHLLNNIHRKKPIHSHNSQGSHGDPERLAFEEEIEKLSNEKTTIQSNISNFKQNISTAKLHLEELQQRLDGMEKRQKNLLNLFERELQNPKFVEQIYQKIESLNLSGHNKKRRIPHVEKSFVDNDSNFGIMEVGNMNIFREDFCSKLNLLSTTSSNEDGESTHNKILCEGELPKEILGFASGKEGHSLSCSPSVNPISEHTDNGACFTFDMDSCLLQSGKLNSLEPKTGESDCDQICCILSLTLTSSPAQDISPQIDGQEIRKSVESSFHTNEHKECDFGAFSNKNLDNVVTNLASSIESPSNDQAIIAAPVKDRVNDLFWSQYLTE 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02529 429 Pfam HSF-type DNA-binding 23 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g02529 429 PRINTS Heat shock factor (HSF) domain signature 23 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g02529 429 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g02529 429 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g02529 429 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 15 429 - -
Tsu07g02529 429 SMART hsfneu3 19 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Tsu07g02529 429 Coils Coil 129 184 - -
Tsu07g02529 429 Gene3D - 18 113 IPR036388 -
Tsu07g02529 429 SUPERFAMILY "Winged helix" DNA-binding domain 19 112 IPR036390 -
Tsu07g02529 429 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 15 429 IPR027725 -
Tsu07g02529 429 ProSitePatterns HSF-type DNA-binding domain signature. 62 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02529 Tsu-Chr7 29054559 29056957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02529 23 429 HSF AT4G13980 43.224 4.74e-91 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Tsu07g02529 HSF_DNA-bind 2.4e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02529 K09419 - gmx:100786408 411.764