Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02516 ATGGCTCctccaaaatcaaaactcaaaaccctaatttctctctctaaactcttcctttctttctctctcctccTCCACACCGCCATTGCCGACGATGCCGTTTTCATGAACAAGCTTGCAAAAGCCCTTACTCCAACTCCATCAGGGTGGTCATCGACAACCACATTCTGCAACTGGAGCGGCGTCAAATGCGACGGTTCAAACCGCGTAACATCGATCAACTTATCTTCAAAATCACTCACCGGAACACTACCTTCCGATCTGAACTCACTGTCAGAACTCACTACACTTTCTCTTCAATCCAACTCTCTCTCTGGCGAGTTACCTTCACTCGCTAATCTCTCAAATCTTCAAACGGTTTTTCTCGCAAACAACAACTTCACTTCAATCGCTAAAGGTTGCTTTGAAGGACTCACCAGTCTCCAGAAATTTTCCTTAACTCAGAACACTAACCTTGCACCGTGGACGATTCCGAATGAGTTGACTCAGTCTTCGAATCTCGTCGAACTTGACCTTGGTCAAACGAATCTCATAGGTTCATTGCCGGATATATTCGATCCATTGGTTAGTTTGCAGAATCTTCGTCTTTCTTACAACAATCTCACCGGTGATTTACCTAAGTCATTCTCCGGATCTGGGATTCAGAATTTGTGGCTTAATAATCAGCAAGATGATTTTGGGTTTACTGGTTCTATTGATTTGCTTTCTTCGATGTCACATTTGACTCAAGTTTGGTTTCAGAAGAACAAGTTCACTGGTCCAATTCCTGATTTATCAAACTGTACTAATTTGTTCGATCTTCAGCTTCGTGATAATCAGTTAACAGGCGTTGTTCCGTCTTCTTTGATGAGTTTATCTAGCTTGACTAATGTTTCGTTGGATAATAACAAGTTGCAGGGTCCTTTTCCTTCTTTTGGGAAAGGTGTAAAGGTTACTCTTGATGATGGGATTAATAGCTTTTGTGGAAAAACTCCTGGACCTTGTGATCCTAGGGTTACAGCTTTACTTGATATTGCTGCTGGTTTTGGGTATCCTCTTCAGTTGGCTAGTTATTGGAGAGGGAATGATCCTTGTGATGATTGGAGCTTTGTTGTGTGTTCAGGACCGAAGATTATTACAATCAATTTAGCAAAACAGCATTTGAATGGGACCATTTCACCTGCATTTGGGAATTTAACTGATTTGAGGAATTTATATTTAGGTGGTAATAATTTGTCTGGTTCCATACCGGGGAGTTTGACGGGTTTGACTCAACTTGAGGTTTTGGATGTGTCTAACAACAATCTATCTGGAGATATTCCTAAGTTTTCGGGTAAAGTGAAGTTCAATTCTGCTGGTAATGTTTTGCTTGGGCATTCGGGAGGTGGTGGAGGAAGTGGAACTACTCCATCAACGGATTCTGGTGGTGCACCAAACGGAAGTCCATCGGGAAAAGCAAGTGGTTCTTCACTTTCGCCTGGTTGGATTGCAGGTATAGCTGTTATTGTGGTGTTTTTTGTTGCAGTGgtgttgtttgtgttttgtaAGTGTTATACTAAGAACCGGAGGCATGGGAAATTCGGAAGGGTTAATAATCCTGAAAATGGTAAAGGCGATGTTAAAATTGATGTCATGAGTGTTTCTAATTCTAATGGATATGGTGGAGTTGCGAGCGAGTTACAGAGTCAGGGAAGTGAGCGCAGTGACATTCAGGTTTTTGAGGGTGGAAATGTTACTATTTCTATCCAAGTTCTTAGGCAAGTAACTGGTAATTTCAGTGAAGATAACATTTTGGGTAGGGGAGGATTCGGAGTTGTTTATAAAGGGGAATTGCATGATGGAACTAAGATTGCCGTGAAGAGGATGGAATCTGTTGCAGTGGGAACTAAGGGATTGAATGAGTTCCAAGCAGAGATAGCAGTTCTAACTAAAGTTAGGCATAGGCATTTGGTTGCTCTTTTAGGATTCTGCATAAATGGGCATGAAAGGCTTTTGGTGTATGAGTATATGCCACAAGGAACATTAACACAACATCTGTTTGATTGGGGTGAAAATGGATGTGCTCCTTTGACTTGGAAACAGAGGGTAGCGATAGCTTTGGATGTAGCGCGGGGAGTGGAATACTTGCACAGCTTAGCTCAACAAAGCTTCATTCACAGAGACTTAAAACCCTCCAACATACTATTGGGTGATGACATGAGAGCAAAGGTTGCAGATTTCGGGTTGGTTAAAAATGCCCCGGATGGCAAATATTCCGTCGAGACAAGGTTGGCCGGAACATTTGGATATTTGGCACCTGAATATGCAGCCACTGGAAGAGTGACAACCAAAGTAGATGTTTACGCATTTGGAGTAGTTCTGATGGAACTGATTACTGGTAGAAGGGCATTGGACGATTCTATGCCTGACGAAAGATCGCATTTGGTTTCATGGTTCCGTAGGGTACTAGTCAACAAGGAGAACATCCCTAAGGCAATCGATCAAACACTGAACCCCGACGAAGAAACCATGGAGAGCATATATAAAATTGCTGAGCTTGCAGGCCATTGCACTGCTCGCGAACCACACCAGAGACCAGATATGGGACATGCCGTGAATGTCCTCGTTCCTCTAGTAGAGCAATGGAAGCCTAGCAAccatgaagaagaagatggttATGGTATTGACCTTCACTTGAGCCTTCCTCAAGCTCTGCAAAGATGGCAAGCCAATGAAGGCACTTCCACAATGTTTAATGACATGTCTTTCTCACAAACTCAATCAAGTATTCCATCAAAACCTTCAGGATTTGCAGACTCCTTTGATTCAATGGATTGCCGGTAA 2802 0.4118 MAPPKSKLKTLISLSKLFLSFSLLLHTAIADDAVFMNKLAKALTPTPSGWSSTTTFCNWSGVKCDGSNRVTSINLSSKSLTGTLPSDLNSLSELTTLSLQSNSLSGELPSLANLSNLQTVFLANNNFTSIAKGCFEGLTSLQKFSLTQNTNLAPWTIPNELTQSSNLVELDLGQTNLIGSLPDIFDPLVSLQNLRLSYNNLTGDLPKSFSGSGIQNLWLNNQQDDFGFTGSIDLLSSMSHLTQVWFQKNKFTGPIPDLSNCTNLFDLQLRDNQLTGVVPSSLMSLSSLTNVSLDNNKLQGPFPSFGKGVKVTLDDGINSFCGKTPGPCDPRVTALLDIAAGFGYPLQLASYWRGNDPCDDWSFVVCSGPKIITINLAKQHLNGTISPAFGNLTDLRNLYLGGNNLSGSIPGSLTGLTQLEVLDVSNNNLSGDIPKFSGKVKFNSAGNVLLGHSGGGGGSGTTPSTDSGGAPNGSPSGKASGSSLSPGWIAGIAVIVVFFVAVVLFVFCKCYTKNRRHGKFGRVNNPENGKGDVKIDVMSVSNSNGYGGVASELQSQGSERSDIQVFEGGNVTISIQVLRQVTGNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAVGTKGLNEFQAEIAVLTKVRHRHLVALLGFCINGHERLLVYEYMPQGTLTQHLFDWGENGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRRALDDSMPDERSHLVSWFRRVLVNKENIPKAIDQTLNPDEETMESIYKIAELAGHCTAREPHQRPDMGHAVNVLVPLVEQWKPSNHEEEDGYGIDLHLSLPQALQRWQANEGTSTMFNDMSFSQTQSSIPSKPSGFADSFDSMDCR 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02516 933 Gene3D Phosphorylase Kinase; domain 1 547 662 - -
Tsu07g02516 933 SUPERFAMILY Protein kinase-like (PK-like) 562 861 IPR011009 -
Tsu07g02516 933 PANTHER RECEPTOR PROTEIN KINASE TMK1-RELATED 19 933 - -
Tsu07g02516 933 Pfam Protein tyrosine and serine/threonine kinase 588 859 IPR001245 GO:0004672|GO:0006468
Tsu07g02516 933 MobiDBLite consensus disorder prediction 457 480 - -
Tsu07g02516 933 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Tsu07g02516 933 MobiDBLite consensus disorder prediction 910 933 - -
Tsu07g02516 933 SMART serkin_6 585 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02516 933 SMART LRR_typ_2 392 415 IPR003591 -
Tsu07g02516 933 SMART LRR_typ_2 188 211 IPR003591 -
Tsu07g02516 933 SMART LRR_typ_2 114 137 IPR003591 -
Tsu07g02516 933 SMART LRR_typ_2 416 440 IPR003591 -
Tsu07g02516 933 ProSiteProfiles Leucine-rich repeat profile. 93 115 IPR001611 GO:0005515
Tsu07g02516 933 ProSiteProfiles Protein kinase domain profile. 585 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02516 933 ProSitePatterns Protein kinases ATP-binding region signature. 591 613 IPR017441 GO:0005524
Tsu07g02516 933 PANTHER OSJNBA0070M12.3 PROTEIN 19 933 - -
Tsu07g02516 933 SUPERFAMILY L domain-like 47 437 - -
Tsu07g02516 933 Pfam Leucine rich repeat N-terminal domain 332 367 IPR013210 -
Tsu07g02516 933 Pfam Leucine rich repeat N-terminal domain 31 65 IPR013210 -
Tsu07g02516 933 Gene3D Transferase(Phosphotransferase) domain 1 663 884 - -
Tsu07g02516 933 CDD STKc_IRAK 591 864 - -
Tsu07g02516 933 Pfam Leucine rich repeat 373 429 IPR001611 GO:0005515
Tsu07g02516 933 Pfam Leucine rich repeat 113 149 IPR001611 GO:0005515
Tsu07g02516 933 Gene3D Ribonuclease Inhibitor 330 453 IPR032675 -
Tsu07g02516 933 Gene3D Ribonuclease Inhibitor 31 328 IPR032675 -
Tsu07g02516 933 MobiDBLite consensus disorder prediction 453 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02516 Tsu-Chr7 28838976 28843479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02516 70 861 Receptor kinase-like Gene Family AT5G07280 33.252 2.16e-95 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Tsu07g02516 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02516 - - gmx:100781851 1430.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02516 07 28838976 28843479 Tsu07g02516 07 28838976 28843479 ECH