Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02481 ATGGGAGATCAACCAATAACCAGGGTAGACATCGAGGGATTTACCGCATCCCTAATTGCTTTGGCTGCACAAATAACGATGTTATCAAATGGTTTGAACAACAACATAAACGATAACAACAACGACAATAGAAACGACAAAAACAACGACGAcaacaaccaaaacaacaacaaccgcaACAACAGGGGAGGAGAACCAATCCCGGTTATTAGGGTTCGTAATAACAAACATACTCGTGACACTGATTTGGAATACTATGAGCGTAGATATTACAAAAAGTTGAAGGATGATTACTACGAGTTTAAAATCTCTGATTCAATATATCGGTGTCCTTTTTGCAACAACAAAGATTACTCCTTGACCGGCCTTTTGAGATATGCTTCCAGAATGGCAGGTAACTCGCGTAAGACGATTAAAGATATTGCTAAACATTCTGTTTTGATAACGTATATTGAAAGGTATCTTAATATTCAAGTCGATGAAACATTTAACATTATCAATAATGACACAACTGAAATAAACGATCCATCTGTAGCTGGAACGAATCGAATTATTGAGGATTTGAGTTCTTCAGAGGTGGAGGAGACTGATGTTTTCGTTGCTTCAACTATGTCGGCTATTGGTATTTCTCAGTCAAGTTCTTTTGCTCCTGACTCAAGTAAAGCAAAGTCAGCTACTGCTTCCATATTTGGAATGATTGATAAAACATCAAAGATAGATCCTACTGACGAATCCGGTACCACTCTAGATGGCGTTAAAGGCGAAGTTGAGCTTCATCATGTTAGTTTCGAGTATCCATCTCGGCCTGATATTCAAATTTTCCAAGACCTCAATTTGAACATCCATTCTGGCAAGACAGTAGCACTTGTCGGGGAAAGTGGCAGTGGAAAATCAACTGTGACTGCTTTATTgcaaagattttga 924 0.369 MGDQPITRVDIEGFTASLIALAAQITMLSNGLNNNINDNNNDNRNDKNNDDNNQNNNNRNNRGGEPIPVIRVRNNKHTRDTDLEYYERRYYKKLKDDYYEFKISDSIYRCPFCNNKDYSLTGLLRYASRMAGNSRKTIKDIAKHSVLITYIERYLNIQVDETFNIINNDTTEINDPSVAGTNRIIEDLSSSEVEETDVFVASTMSAIGISQSSSFAPDSSKAKSATASIFGMIDKTSKIDPTDESGTTLDGVKGEVELHHVSFEYPSRPDIQIFQDLNLNIHSGKTVALVGESGSGKSTVTALLQRF 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02481 307 MobiDBLite consensus disorder prediction 36 69 - -
Tsu07g02481 307 PANTHER ABC TRANSPORTER B FAMILY MEMBER 21 196 307 - -
Tsu07g02481 307 Pfam ABC transporter 275 306 IPR003439 GO:0005524
Tsu07g02481 307 Gene3D - 246 307 IPR027417 -
Tsu07g02481 307 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 196 307 IPR039421 -
Tsu07g02481 307 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 247 307 IPR027417 -
Tsu07g02481 307 Gene3D ABC transporter type 1, transmembrane domain 189 245 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02481 Tsu-Chr7 28410659 28411582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02481 198 307 Calmodulin-binding Proteins AT2G36910 49.550 6.14e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02481 K05658 - gmx:100800034 184.882