Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu07g02477 | ATGAACTTGGTGTTTCTTCTATTGTTATTGTTGGCTAGTGTTTGTTCTTTTGCTCTTCCTCAGCTTGATTTACaagAAGATGCACTATATGCATTGAAGTTATCTCTGAATGCTTCACCTAACCAGCTTACTAACTGGAACAAAAATCAAGTAAACCCGTGTACTTGGTCCAATGTTTACTGCGACCAGAATAGCAATGTTATTCAAgtTTCACTAACATTTATGGGATTCTCCGGAACCTTGACACCAAGAATAGGAGCTCTCAAAAGTCTCATAACTCTTTCTTTACAAGGGAATAACATCAGTGGTGACATACCAAAAGAATTTGGAAATCTTACAAACTTGGTGAGATTGGATCTGGATCACAACATATTAACCGGTGAAATACCGTCTTCCCTTGGTAATCTTAAAAAGCTTCAATTCTTGACGTTAAGTCAAAACAATCTCAACGGGACTATTCCAGAATCACTTGGCAGTCTTCCAAACTTGAGCAATATTCTGCTAGACTCAAATGATTTCAGCGGAAATATTCCAGAACAGTTATTCAATGTTCCTAAGTACAATTTCACTGGAAATAAGTTGGATTGTGGTATAACTTATCAGCAACTTTGCACATCTGATAATGCAAATCAAGGTACATCACACAAATCAAAAGTAGGTCTCATAGTTGGAACAGTTATAGGTTTAATTGTTATTCTTTTTCTTGGTGGCCTTTTGTTTTTCTGGTGCAAACGGTACAAACGTGAAGTTTTTGTAGATGTTGCAGGCGAAGTTGATCGGCGAATTACATTAGgtcaaataaaatgtttttccTGGAGAGAACTACAGATAGCTACAGACAACTTCAGTGAGAGAAATGTTTTAGGACAGGGAGGCTTTggaaaggtttataaaggtgtTCTAACTGACGGGACAAAAATTGCTGTCAAAAGGCTAACTGATTATGAAAGTCCCGGTGGTGATCAAGCTTTCCAGCGTGAAGTTGAAATGATAAGCGTTGCTGTCCATAGGAACCTTTTACGGCTCATTGGGTTTTGTACTACCCCAACTGAACGCCTCTTAGTTTATCCCTTCATGCAGAACTTAAGTGTTGCCTCTCGACTACGAGAACTCAAACCTGGGGAATCTGTTTTGGATTGGGCTACAAGAAAACGAGTGGCTCTTGGAACAGCTCGTGGCCTTGAATATCTTCATGAGCAATGTGATCCCAAAATTATTCATAGAGATGTAAAGGCAGCTAATATATTACTAGATGGAGATTTTGAAGCAGTCGTCGGTGACTTTGGTTTGGCAAAATTGGTCGATGTTCGAAGGACTAATGTGACAACTCAAATTCGTGGGACAATGGGCCATATAGCTCCCGAATACTTGTCTACCGGAAAATCTTCAGAAAAGACAGATGTTTTTAGTTATGGGATTATGCTTTTGGAGCTTGTTACAGGTCAACGTGCAATCGACTTTTCACGTCTGGAAGATCAAGATGATGTGTTACTGCTTGACCATGCAAAGAAGCTACAACGGGAGAAAAGACTAGATGCTATTGTCGACTGCAATCTTGATAAAAATTACAACATAGAAGAAGTTGAAGTGATAGTACAAGTTGCATTGCTGTGCACGCAAGCAACGCCAGAGGATCGTCCGGCAATGTCAGAGGTTGTAAGAATGTTGGAGGGAGAGGGGCTAGCCGAAAGGTGGGAAGAATGGAGGCACGTGGAGGTTACTCGGACGCAAGACTCCGAGAGACTGCAAAGAAGATTTGCGTGGGGAGATGATTCAATTCATAACCAAGATGCCATCGAGTTGTCGGGTGGAAGATGA | 1818 | 0.3977 | MNLVFLLLLLLASVCSFALPQLDLQEDALYALKLSLNASPNQLTNWNKNQVNPCTWSNVYCDQNSNVIQVSLTFMGFSGTLTPRIGALKSLITLSLQGNNISGDIPKEFGNLTNLVRLDLDHNILTGEIPSSLGNLKKLQFLTLSQNNLNGTIPESLGSLPNLSNILLDSNDFSGNIPEQLFNVPKYNFTGNKLDCGITYQQLCTSDNANQGTSHKSKVGLIVGTVIGLIVILFLGGLLFFWCKRYKREVFVDVAGEVDRRITLGQIKCFSWRELQIATDNFSERNVLGQGGFGKVYKGVLTDGTKIAVKRLTDYESPGGDQAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVASRLRELKPGESVLDWATRKRVALGTARGLEYLHEQCDPKIIHRDVKAANILLDGDFEAVVGDFGLAKLVDVRRTNVTTQIRGTMGHIAPEYLSTGKSSEKTDVFSYGIMLLELVTGQRAIDFSRLEDQDDVLLLDHAKKLQREKRLDAIVDCNLDKNYNIEEVEVIVQVALLCTQATPEDRPAMSEVVRMLEGEGLAERWEEWRHVEVTRTQDSERLQRRFAWGDDSIHNQDAIELSGGR | 605 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu07g02477 | 605 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 2 | 605 | - | - | |
Tsu07g02477 | 605 | SMART | serkin_6 | 282 | 556 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu07g02477 | 605 | Gene3D | Ribonuclease Inhibitor | 23 | 206 | IPR032675 | - | |
Tsu07g02477 | 605 | Pfam | Protein kinase domain | 283 | 554 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu07g02477 | 605 | SUPERFAMILY | L domain-like | 26 | 192 | - | - | |
Tsu07g02477 | 605 | PANTHER | LRR RECEPTOR-LIKE KINASE | 2 | 605 | - | - | |
Tsu07g02477 | 605 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 405 | 417 | IPR008271 | GO:0004672|GO:0006468 | |
Tsu07g02477 | 605 | Gene3D | Phosphorylase Kinase; domain 1 | 251 | 358 | - | - | |
Tsu07g02477 | 605 | ProSiteProfiles | Phosphatidylinositol-specific phospholipase X-box domain profile. | 450 | 561 | - | - | |
Tsu07g02477 | 605 | ProSiteProfiles | Protein kinase domain profile. | 282 | 561 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu07g02477 | 605 | Gene3D | Transferase(Phosphotransferase) domain 1 | 359 | 576 | - | - | |
Tsu07g02477 | 605 | Pfam | Leucine rich repeat N-terminal domain | 25 | 62 | IPR013210 | - | |
Tsu07g02477 | 605 | CDD | TM_EGFR-like | 217 | 248 | - | - | |
Tsu07g02477 | 605 | ProSitePatterns | Protein kinases ATP-binding region signature. | 288 | 310 | IPR017441 | GO:0005524 | |
Tsu07g02477 | 605 | SUPERFAMILY | Protein kinase-like (PK-like) | 261 | 557 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu07g02477 | Tsu-Chr7 | 28392124 | 28397257 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu07g02477 | 8 | 605 | Receptor kinase-like Gene Family | AT5G10290 | 73.754 | 0.0 | 872 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-II | Tsu07g02477 | Pkinase | 1.5e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu07g02477 | - | - | gmx:100786654 | 989.178 |