Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02474 ATGGGTAGTAGCAGATGTTTTAGCTTCACTACATGTAGTGACAGATGGTTCCGTCACTCATTCTCCAAATCCGGCTTAAAATCAACAACCACCGATCTCGGCGACGGAACCGTTATGCATTGTTGGGtcccaaaaacaaacaaaaaacacaaacctTCTCTTATTCTCATTCATGGAATCGGTGCTAACGCAATGTGGCAATGGAACCCTTTCATTTCACAACTCACGCGTCACTTTAATGTCTACGTACCCGACTTGGTTTTCTTCGGGGATTCAACCACTACCCGACCCGAAAGATCTGAACAGTTTCAAGCTAAATGTGTTATGGGTTTGTTGGAAGGTCATGGTGTGAGTAGAATGAGTGTGGTTGGGTTGAGTTATGGTGGATTTGTGGCGTATAGTATGGCGGCTATGTTTCCGGAGAAGGTGGTGAAATTGGTGGTTTGTTGTGCTGGAGTTTGTTTGGAAGATAAGGATATGGATGATGGGTTGTTTCAGGTGAAAAGTGTTGATGAAGCTGTTAGTGTTTTGTTGCCTCAGACACCAGAAATGATTAAGGAGTTGGTTAAGCTTACTTTTTTTAAGCCTATTAGAACCTTGCCTAATTGGTTTCTAAATGATTTCATTGAAGTGATGTGTATAGAACACCGCCAGGAGAAGAAAGAACTAATCCAAGCACTGCATAAGGACAGAAATTTGTCTAATCTTCCCAAGATAACccaaCCTATGTTAATTATCTGGGGAGAACATGACCGTGTATTCCCATTGGAATTAGCCCACAGATTGAAACGACATGTGGGAGAGAAGGCAGAAGTAGAACTAGTGGTAATTGAGAATGCAGGACATGCAATAAATGCAGAGAAGCCGAAAGAATTGTTCAAGAATTTGAAATCCTTCCTCGTTGATCCCTTCACAACTTCTAAACAAGAAAATCAAAGCAATGATCATAAGGCTAGTTCTGTTTATCTCCCAGTATATGGGAATTTGGAACATATAAACGCCTACAGAACAGGTTTCAACCATATCTCCAAATACAACACAACAgCCAGTGGAATTTCATcaagaaattttatatttattATTATAGCCAGATCCAGCACCATAGCCAAGTTCGCATCGTCACGCGATAATGTTACAAGCAGGGTAAACTTTATGGCTGCCTCAAGTTCAACCTTTTTTGCTCGGGATTCCTTGCGTTTTAACACAAGTTCATTTCAAACTTTGCATCGCCGAAGGGGATCAAGGTTTATAGTTAGAGCTGGCACAGATTTCTACACTGTCCTTGGGGTGTCAAAAAATTCTACTAAAGCTGAAATTAAGACTGCTTATCGGAAGCTAGCCCGGAATTATCATCCAGATGTGAAcaaGGAACCTGGTGCAGAAGAGAAATTTAAGGAAATTAGTAATGCATATGAGGTCTTATCAGATGATGAGAAACGATCCATATATGACAAATATGGGGAGGCAGGGCTTAAAGGTCAAGGAATGGGCATGGGGGATTTCAGCAATCCTTTTGATCTGTTTGAGACACTATTTGAGGGCATGGGCGGTGGAATGGGCAGCAGAGGCTCTTGGAATGGAGCAGTTGATGGCGAAGATGAGTATTACAGTCTTGTTTTGAACTTTAAAGAAGCCGTTTTCGGAGTGGAAAAGGAGATAGAGATTAAGCGACTAGAGAATTGTGGAACCTGCGATGGTTCAGGGGCTAAACCAGGGACTAAATCATCCAGATGTAACACTTGTGGTGGTCAGGGTCGGGTTGTCTCACAAACAAGGACTCCATTAGGTATCTTTCAGCAGTCTATGACTTGCTCGACTTGCAATGGGACTGGAGAATCTCGAACACCTTGTAGTACATGTTCTGGGGATGGTCGGGTGAGGAAATCAAAGCGGATAAGTCTCAAGGTTCCAGCCGGTGTGGATTCCGGTAGTCGTTTAAGGGTCCGAAATGAAGGTAACGCTGGAAGGCGTGGTGGTGCTCCTGGTGACCTCTTTGTTATTCTTGAAGTTATCCCAGATCCCGTGCTTAAACGTGAAGACACGAACATTTTATACTCTTGTAAAGTTTCCTATATTGATGCAATCTTGGGGACTACGATTAAGGTTCCAACTGTAGATGGAATGGTGGATTTAAAAATCCCATCCGGTACACAACCAGGATCAACACTTGTAATGGCTAAGAAAGGTGTTCCACTGCTGAATAAAAAGAATATGAGGGGTGATCAAATGGTTCGGGTGCAAGTTGAGATTCCTAAAAAACTGAGCAGCGATGAGAGAAAACTTATCGAGGAACTCTCGGAGTTGAGCAAAGGCGGCAAGACTGCCGCTAGTAGGAGATGA 2340 0.4201 MGSSRCFSFTTCSDRWFRHSFSKSGLKSTTTDLGDGTVMHCWVPKTNKKHKPSLILIHGIGANAMWQWNPFISQLTRHFNVYVPDLVFFGDSTTTRPERSEQFQAKCVMGLLEGHGVSRMSVVGLSYGGFVAYSMAAMFPEKVVKLVVCCAGVCLEDKDMDDGLFQVKSVDEAVSVLLPQTPEMIKELVKLTFFKPIRTLPNWFLNDFIEVMCIEHRQEKKELIQALHKDRNLSNLPKITQPMLIIWGEHDRVFPLELAHRLKRHVGEKAEVELVVIENAGHAINAEKPKELFKNLKSFLVDPFTTSKQENQSNDHKASSVYLPVYGNLEHINAYRTGFNHISKYNTTASGISSRNFIFIIIARSSTIAKFASSRDNVTSRVNFMAASSSTFFARDSLRFNTSSFQTLHRRRGSRFIVRAGTDFYTVLGVSKNSTKAEIKTAYRKLARNYHPDVNKEPGAEEKFKEISNAYEVLSDDEKRSIYDKYGEAGLKGQGMGMGDFSNPFDLFETLFEGMGGGMGSRGSWNGAVDGEDEYYSLVLNFKEAVFGVEKEIEIKRLENCGTCDGSGAKPGTKSSRCNTCGGQGRVVSQTRTPLGIFQQSMTCSTCNGTGESRTPCSTCSGDGRVRKSKRISLKVPAGVDSGSRLRVRNEGNAGRRGGAPGDLFVILEVIPDPVLKREDTNILYSCKVSYIDAILGTTIKVPTVDGMVDLKIPSGTQPGSTLVMAKKGVPLLNKKNMRGDQMVRVQVEIPKKLSSDERKLIEELSELSKGGKTAASRR 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02474 779 Gene3D - 531 666 - -
Tsu07g02474 779 Pfam DnaJ central domain 561 624 IPR001305 GO:0031072|GO:0051082
Tsu07g02474 779 PRINTS Epoxide hydrolase signature 136 149 IPR000639 GO:0003824
Tsu07g02474 779 PRINTS Epoxide hydrolase signature 78 93 IPR000639 GO:0003824
Tsu07g02474 779 PRINTS Epoxide hydrolase signature 122 135 IPR000639 GO:0003824
Tsu07g02474 779 PRINTS Epoxide hydrolase signature 277 299 IPR000639 GO:0003824
Tsu07g02474 779 SUPERFAMILY Chaperone J-domain 421 522 IPR036869 -
Tsu07g02474 779 Gene3D - 671 778 - -
Tsu07g02474 779 SUPERFAMILY HSP40/DnaJ peptide-binding domain 529 684 IPR008971 GO:0006457|GO:0051082
Tsu07g02474 779 CDD DnaJ_zf 561 624 IPR001305 GO:0031072|GO:0051082
Tsu07g02474 779 ProSiteProfiles dnaJ domain profile. 423 487 IPR001623 -
Tsu07g02474 779 Pfam DnaJ domain 423 484 IPR001623 -
Tsu07g02474 779 SUPERFAMILY alpha/beta-Hydrolases 26 300 IPR029058 -
Tsu07g02474 779 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 548 628 IPR036410 -
Tsu07g02474 779 SMART dnaj_3 422 479 IPR001623 -
Tsu07g02474 779 PRINTS Alpha/beta hydrolase fold signature 136 149 IPR000073 -
Tsu07g02474 779 PRINTS Alpha/beta hydrolase fold signature 243 257 IPR000073 -
Tsu07g02474 779 PRINTS Alpha/beta hydrolase fold signature 122 135 IPR000073 -
Tsu07g02474 779 PRINTS Alpha/beta hydrolase fold signature 78 93 IPR000073 -
Tsu07g02474 779 ProSitePatterns Nt-dnaJ domain signature. 464 483 IPR018253 -
Tsu07g02474 779 Pfam Alpha/beta hydrolase family 54 292 IPR000073 -
Tsu07g02474 779 PRINTS DnaJ domain signature 459 479 IPR001623 -
Tsu07g02474 779 PRINTS DnaJ domain signature 425 443 IPR001623 -
Tsu07g02474 779 PRINTS DnaJ domain signature 479 498 IPR001623 -
Tsu07g02474 779 PRINTS DnaJ domain signature 443 458 IPR001623 -
Tsu07g02474 779 ProSiteProfiles Zinc finger CR-type profile. 548 629 IPR001305 GO:0031072|GO:0051082
Tsu07g02474 779 Gene3D - 561 624 - -
Tsu07g02474 779 Hamap Chaperone protein DnaJ [dnaJ]. 420 775 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Tsu07g02474 779 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 366 779 - -
Tsu07g02474 779 PANTHER BNAA01G34580D PROTEIN 366 779 - -
Tsu07g02474 779 TIGRFAM DnaJ_bact: chaperone protein DnaJ 423 767 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Tsu07g02474 779 CDD DnaJ 423 476 IPR001623 -
Tsu07g02474 779 SUPERFAMILY HSP40/DnaJ peptide-binding domain 676 762 IPR008971 GO:0006457|GO:0051082
Tsu07g02474 779 Gene3D alpha/beta hydrolase 14 302 IPR029058 -
Tsu07g02474 779 CDD DnaJ_C 532 754 - -
Tsu07g02474 779 Gene3D DnaJ domain 420 524 IPR036869 -
Tsu07g02474 779 Pfam DnaJ C terminal domain 536 751 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02474 Tsu-Chr7 28364741 28374420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02474 425 486 C2H2 Transcription Factor Family AT1G74250 45.588 2.57e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02474 K03686 - gmx:100786143 684.1