Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02427 ATGGATTACTCTACAGAGTTTTCTATGGATCGTCGTCCTCGTAAAAGGGCTAAATTAGCTTGGGAAATTCCTCAAACCCACTCAAAGGCTCATTCGGGGATTTATTGTGGACAAGAGTTTGCTAATGCGACAACAAGCTATGGAACACTGAGGGTACTTCCTGACCATGCTGGTCTTTCGATAAAGGGATTGGCTGAAAGAGGTTCTCCTCAATGGCGAGATGATGACAAAGATGGACATTACATGTTTGCTCTTGGAGAAAATTTAACTTCTCGGTATAAGATCCTCAGGAAAATTGGTGAAgGGACTTTTGGTCAGGTTTTGGAATGCTGGGATAGAGAAACGAGGGAGATGGTTGCCATAAAAGTTGTGAGGAGTGTTAAGAAATATCGTGAAGCAGCAATGTTAGAAGTTGATGTGCTCCAGTTGATTGGGAAGTATGACAGGAATGGTAGCCGATGTGTTCAAATACGCAACTGGTTTGACTACCGGAACCATATTTGTATTGTATTTGAGATGCTTGGACCAAGCTTATATGATTTTCTCCGGAAGAACAACTATCGCCCGTTTCCAGTTGATCTTGTTCGTGAGCTAGGAAGACAATTGTTGGAAAGTGTAGCATTCGTGCATGATCTGCGCCTCATCCACACTGATTTGAAGCCTgaaaatatactttttatttcCCCAGAATATGTAAAAGTGCCTGACTACAAGGTCATGTTCCGGTCACCAAAAGAGGGAACCTCTTATAAGAGACTGCCCAAGTCAAGTGCTATTAAGGTTATCGATTTTGGTAGTACGGCCTATGAGCACCAAGATCACAACTATATTGTCTCTACTCGGCATTATAGGGCACCCGAGGTTATTCTTGGACTTGGTTGGAATTTTCCGTGTGACATATGGAGTATTGGTTGCATTTTGGTTGAGTTGTGTTCGGGAGAAGCTTTGTTTCAGACGCATGAAAATTTAGAGCATCTAGCCATGATGGAGAGGGTTTTAGGCCCAATACCTCCGCACATGTTGAAACGAGTAGACCGCGCCGCAGAGAAGTATATCAGAAGGGGTAGACTGAACTGGCCCGAAGGAGCAGTCTCTCGAGAAAGCATCAAAGCTGTCTTGAAATTACCCCGACTTCCAGTCTGTAACATAATTTAG 1155 0.4294 MDYSTEFSMDRRPRKRAKLAWEIPQTHSKAHSGIYCGQEFANATTSYGTLRVLPDHAGLSIKGLAERGSPQWRDDDKDGHYMFALGENLTSRYKILRKIGEGTFGQVLECWDRETREMVAIKVVRSVKKYREAAMLEVDVLQLIGKYDRNGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRELGRQLLESVAFVHDLRLIHTDLKPENILFISPEYVKVPDYKVMFRSPKEGTSYKRLPKSSAIKVIDFGSTAYEHQDHNYIVSTRHYRAPEVILGLGWNFPCDIWSIGCILVELCSGEALFQTHENLEHLAMMERVLGPIPPHMLKRVDRAAEKYIRRGRLNWPEGAVSRESIKAVLKLPRLPVCNII 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02427 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Tsu07g02427 384 SMART serkin_6 93 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02427 384 SUPERFAMILY Protein kinase-like (PK-like) 80 364 IPR011009 -
Tsu07g02427 384 PANTHER KINASE AFC1 1 379 - -
Tsu07g02427 384 Gene3D Phosphorylase Kinase; domain 1 80 173 - -
Tsu07g02427 384 CDD PKc_CLK 80 377 - -
Tsu07g02427 384 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 379 - -
Tsu07g02427 384 Gene3D Transferase(Phosphotransferase) domain 1 147 369 - -
Tsu07g02427 384 Pfam Protein kinase domain 93 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02427 384 ProSiteProfiles Protein kinase domain profile. 93 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02427 384 ProSitePatterns Protein kinases ATP-binding region signature. 99 129 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02427 Tsu-Chr7 27774268 27778457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02427 90 360 MAP Kinase Gene Family AT3G18040 29.965 2.02e-23 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Tsu07g02427 Pkinase 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02427 K08287 - qsu:112037155 674.085