Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02419 ATGGAAATGATGTTTGATAGCATTGAAGATGCTTGGAAATTTTGGGTTGATTATGGCGGAAAAGTTGGATTCGGCGTGAGGAAACAATATTCAAACAAGAACAAACATGGTATTATTACTTcttataagtttgtttgttgTAAAGAAGGTTTGAGAAAACCAGATAAACGAgattataaaacaattaaacCATGGCCGGAGACCAGGACAAATTGTCAAGAAAGGTTAGGCATCAAGAATATGGATGGAAAATTTATGGTGGTTGATTTTGTGGAGGAACATAACCACGATTTACATCTACCGGAAACAACTCATATGTTGCCATCTCAAagaaaaatctctcaaattCAATGTCAGCAAATTGATCTAGCTGATGATGCTGGACTACAACAAAGAAAGTCATTTGACTTGATGAGTAAAGAAGTAGGAGGTAGAACTAACTTGGGATTTACTCGTATTGATCAAAAGAACTATCTCCGAAAAAAGAGGGAGAGGAGTATGGAACATGGGGATGTTGGTTATTTATTACAATACTTCCAAAAAAAGTTGGTGGAAAATCCAACTTTCTATCATGCATATAAAATGGACAATGAAGATCAAATCACCAACGTGTTTTGGGCAGATGCAAGTATGCTTATTGATTATGAGTGTTTTGGTGATGTGATTTCTCTTGATTCAACATATTGCACAAATACTTCATATAGGCCGCTAGCAGTGTTCTCGGGATTTAACCACCATCGAAAAGCAGTAATTTTTGGGGCTGCATTGTTGTATGACGAAACAACAGAGTCATACAAGTGGCTCTTGGAGACATTTTTAGAGGCTCATAAGCAGAAAATGCCTCAAACAGTTTTTACTGATCAAGCCCAAGCAATGGCAAAAGCGCTAGGTGAGGTTATGCCTGGATCTTACCATGGCTTATGTACGTGGCACTTGATGCAAAATGCCATCAAACGCTTAGGCAATTTAATGAAAGGTGGAACTTGTTTTCTTAGTGATTTGAATAAGTGCATGTATGGCTATGACAACGAAGAACAATTTGAAGAAGGTTGGAGTACTCTCCTTGTGAAGTATGATGCAAAGGAAAGCGAATGGCTGCAAAGATTATACACTATGAAGGAAAAATGGGCATCATGTTACATGAATAAGGTTTTTACATTAGAAATGCGAAGTACTCAACTTAGTGAAAGTGTGAACGCAGATATTAAAAGTTTTATGAATGTGAAGTTGGatattatcaaattttttaagCACTTTGAGGATGTTGTAGAAGAAAAGCGGCATAACGAATTGAAGTGTGAATATGAAGCACGTGAAAAGATTCCAAGACTAAAAAACTCATATTCGAGTATCTTGCAGCAAGTGTCTAAGGTTTATACTCCCActatttttgataaatttcaACACGAGTATGAGTTGTTTGAAGCATGTTTTGTCAAAAGCATTAACATACAATCACCGTTAGTTGACTGTGTTATTGCCACGGAGAGTGATTTGGAAGAGTGGAGAGTGTCATTTGATTTGGATAAGAATTCCATTTCTTGCTCTTGTCACAAGTTTGAAAGTTTTGGCATACTTTGTTGTCATTGTCTAAGATTATTTATTCACATGAATGTCAAATCAGTGCCtgaacaatatattttaaaaaggtgGACAAAGTTAGCAAGAGGTGAGACTTTATCTAATGTTGCTGCTAGTAATGTGGTAGAAGATGTTGATTTATCCCCAACACAACGCTACAATGTGATTTGCCCCCACCTTATTAGGATAGCCATTGAAGCATGTAGAAGTCCAGAAACATTCAATCTCCTTTGCAAAGTTGCTAATGAATTGAATAGGCACATGCTGGAGTTTCAAAACAATCCAACAAGTATTTGTCAAGTGAATGAGTTTATTGCTAAAGTTAAAGAGATTGGTAGTAGAAATGATGGTTCATCACAAGCAAAAGGCctaaaaaaagagaaggaaGAAGGGGTACAAAACGTTTAA 1989 0.3484 MEMMFDSIEDAWKFWVDYGGKVGFGVRKQYSNKNKHGIITSYKFVCCKEGLRKPDKRDYKTIKPWPETRTNCQERLGIKNMDGKFMVVDFVEEHNHDLHLPETTHMLPSQRKISQIQCQQIDLADDAGLQQRKSFDLMSKEVGGRTNLGFTRIDQKNYLRKKRERSMEHGDVGYLLQYFQKKLVENPTFYHAYKMDNEDQITNVFWADASMLIDYECFGDVISLDSTYCTNTSYRPLAVFSGFNHHRKAVIFGAALLYDETTESYKWLLETFLEAHKQKMPQTVFTDQAQAMAKALGEVMPGSYHGLCTWHLMQNAIKRLGNLMKGGTCFLSDLNKCMYGYDNEEQFEEGWSTLLVKYDAKESEWLQRLYTMKEKWASCYMNKVFTLEMRSTQLSESVNADIKSFMNVKLDIIKFFKHFEDVVEEKRHNELKCEYEAREKIPRLKNSYSSILQQVSKVYTPTIFDKFQHEYELFEACFVKSINIQSPLVDCVIATESDLEEWRVSFDLDKNSISCSCHKFESFGILCCHCLRLFIHMNVKSVPEQYILKRWTKLARGETLSNVAASNVVEDVDLSPTQRYNVICPHLIRIAIEACRSPETFNLLCKVANELNRHMLEFQNNPTSICQVNEFIAKVKEIGSRNDGSSQAKGLKKEKEEGVQNV 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02419 662 MobiDBLite consensus disorder prediction 647 662 - -
Tsu07g02419 662 Pfam MULE transposase domain 221 315 IPR018289 -
Tsu07g02419 662 ProSiteProfiles Zinc finger SWIM-type profile. 502 538 IPR007527 GO:0008270
Tsu07g02419 662 MobiDBLite consensus disorder prediction 641 662 - -
Tsu07g02419 662 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 622 IPR031052 GO:0006355
Tsu07g02419 662 PANTHER OS03G0181600 PROTEIN 2 622 - -
Tsu07g02419 662 SMART 26again6 513 540 IPR006564 GO:0008270
Tsu07g02419 662 Pfam SWIM zinc finger 503 536 IPR007527 GO:0008270
Tsu07g02419 662 Pfam FAR1 DNA-binding domain 13 98 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02419 Tsu-Chr7 27674977 27676965 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu07g02419 MULE 2.8e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02419 - - ccaj:109790316 898.271