Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02385 ATGCGAAAGCTTTTGATTGCCGTGTCCCTTTGCGTTGTTTTCATGGCTGTTGAGGTAGTTGGTGGTATTAAGGCTAACAGTCTTGCAATACTGACTGATGCAGCACATTTACTTTCAGATGTTGCTGCATTTGCCATCTCCTTATTTTCTATATGGGCTGGGGGATGGGAACCGAATCCTCGTCAGTCATTTGGATTTTTTCGAATTGAGATTCTTGGTGCTCTGGTTTCGATGCAATTAATATGGCTGCTTGCTGGAATTCTGGTTTATGAAGCCATTGCTAGACTCATTGCAGGTCCTCAAAATGTGGATGGTTTTTTAATGTTTGTAGTTGCAGCATTTGGTCTTGTGGTTAACATCATTATGGCTTTGGTATTGGGTCACGATCACGGCCACGGACATGGACATGATCACGGCCACGGACATGACCATCATGGCCACAGCCATGGTCTTTCAGTTTCTACCAATCGTGATGTAAAGCATACAAAAGATGAGCATCATCACACACATGGCGATCACACTCACCATCATGATGATGAAAAGCATTCAAAAGATGAACACCACCATACTCATGAAGATCATGCACATCATGACCATGACCACAAAGAGGTTACTGAACCACTTCTTGGTGAATCAAAACCAAGATCTGAGAAGAAACGAAACATAAATATACACGGGGCATATCTCCATGTACTTGGGGACTCTATCCAGAGTATTGGAGTGATGATTGGTGGAGCAATCATATGGTATAAACCTGAATGGAAAATTGTTGATTTGATTTGCACTCTAATATTTTCTGTAATTGTTTTGGCCACAACTATCAACATGCTGAGAAACATTTTGGAAGTCCTGATGGAGAGCACCCCGCGTGAGATAGATGCTACCCAGCTTCAAAAGGGGTTATTGGAGATGGAAGATGTAGTGGCTGTTCATGAGCTGCACATATGGGCCATTACAGTTGGGAAGATATTGCTAGCTTGTCATGTTAAAATCAATCCTGAAGCAGATGCCGACATAATGTTGGACAAGGTTATAGACTACATCAAGAGGGTTCATAACATAAGTCATGTAACTATACAGATCGAACgctag 1092 0.4176 MRKLLIAVSLCVVFMAVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSIWAGGWEPNPRQSFGFFRIEILGALVSMQLIWLLAGILVYEAIARLIAGPQNVDGFLMFVVAAFGLVVNIIMALVLGHDHGHGHGHDHGHGHDHHGHSHGLSVSTNRDVKHTKDEHHHTHGDHTHHHDDEKHSKDEHHHTHEDHAHHDHDHKEVTEPLLGESKPRSEKKRNINIHGAYLHVLGDSIQSIGVMIGGAIIWYKPEWKIVDLICTLIFSVIVLATTINMLRNILEVLMESTPREIDATQLQKGLLEMEDVVAVHELHIWAITVGKILLACHVKINPEADADIMLDKVIDYIKRVHNISHVTIQIER 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02385 363 Pfam Cation efflux family 4 285 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Tsu07g02385 363 PANTHER METAL TOLERANCE PROTEIN A1 1 363 - -
Tsu07g02385 363 TIGRFAM CDF: cation diffusion facilitator family transporter 2 363 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Tsu07g02385 363 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 363 - -
Tsu07g02385 363 MobiDBLite consensus disorder prediction 132 217 - -
Tsu07g02385 363 MobiDBLite consensus disorder prediction 144 217 - -
Tsu07g02385 363 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 292 362 IPR036837 -
Tsu07g02385 363 SUPERFAMILY Cation efflux protein transmembrane domain-like 2 286 IPR027469 -
Tsu07g02385 363 Gene3D Cation efflux protein transmembrane domain 1 284 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02385 Tsu-Chr7 27180659 27181750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02385 1 363 Inorganic Solute Cotransporters AT3G58810 67.493 8.57e-154 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02385 K14689 - gmx:100794876 489.574