Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02383 ATGTCGGAATCGGATTCTGCTACTCCAATTTTGGTTGTTGTGGCCATAgTTGTAATTGCTGTTAAGGTAGGTATTTTAGTTTGTGTGtgtagaagaagaaaacaaacaaatggTGGAACCATTAATCCATCAGAAACACAATTTATAACACTCACTATGGATAAATTTTTGAATGACATGGAAAGAGAAAAGCCAATAAGATTCAGTGGTCAACAACTAAGAATTGCAACTGACAATTACTCCAACATATTGGGGTCAGGTGGATTTGGAACAGTTTACAAAGGAATTTTCAGTAACGGAACGATGGTAGCCGTGAAGGTTTTACGCGGCAGTTCTGGGAAGAAAATTGACGAACAATTTATGGCGGAAGTTGGAACAATTGGTAGAATTCATCACTTCAATCTTGTTAGGTTATatggattttgttttgaaagaaATTTGATAGCACTTGTTTATGAATACATGGGGAATGGATCACTTGATAGGtatttatttgatgataaaaagGCGTTAGGATACGAAAAGCTTCATGAGATTGCAATTGGTACGGCAAGAGGCATTGCTTACTTGCATGACGAGTGCCAACAAAGAATAATCCACTATGATATAAAACCGGGAAATATTCTCTTAGATAAGAATTTCTATCCTAAAGTTGCTGATTTTGGTTTGGCTAAACTTTGCAACAGGGAAAATACTCACATAACGATGACGGGAGGAAGAGGGACACCTGGTTATGCCGCACCTGAACTTTGGATGCCTTTTCCTATAACTCACAAATGTGATGTTTATAGTTTTGGTATGCTATTATTTGAAATAGTCGGTAGGAGAAGAAACCTTGACACTAAGAATACTGAAAGTCAAGAGTGGTTTCCAATATGGGTTTGGAAAAAATTTGATGCTGGACTGTTGGAGGAGGCAATGATAGTTTGTGGAATAGaggagaaaaataaagagattgCTGAGAGAATGGTTAAGATAGCTTTATGCTGTGTTCAATATAGGCCAGAATTAAGGCCTATAATGAGTGTTGTGGTAAAAATGTTGGAAGGTGCATTAGAAATTCCAAAGATTTTTAACCCATTTCAGTATTTGATGGATGGGGCTAATTTTGCTACTCATCCTGTCCAAGTGACAGATACATATACAACTACTGTTTCTTCCCCTGCCTCTTCTGTTATGGTAAGTGATTCCAATATTGAATGTGCTACTCCTATTATGAAGAAGTATGAGATTGAATTAGCATCTAGCATATCATGA 1257 0.3492 MSESDSATPILVVVAIVVIAVKVGILVCVCRRRKQTNGGTINPSETQFITLTMDKFLNDMEREKPIRFSGQQLRIATDNYSNILGSGGFGTVYKGIFSNGTMVAVKVLRGSSGKKIDEQFMAEVGTIGRIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDRYLFDDKKALGYEKLHEIAIGTARGIAYLHDECQQRIIHYDIKPGNILLDKNFYPKVADFGLAKLCNRENTHITMTGGRGTPGYAAPELWMPFPITHKCDVYSFGMLLFEIVGRRRNLDTKNTESQEWFPIWVWKKFDAGLLEEAMIVCGIEEKNKEIAERMVKIALCCVQYRPELRPIMSVVVKMLEGALEIPKIFNPFQYLMDGANFATHPVQVTDTYTTTVSSPASSVMVSDSNIECATPIMKKYEIELASSIS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02383 418 Pfam Protein kinase domain 82 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02383 418 Gene3D Transferase(Phosphotransferase) domain 1 155 357 - -
Tsu07g02383 418 SUPERFAMILY Protein kinase-like (PK-like) 61 349 IPR011009 -
Tsu07g02383 418 PANTHER RUST RESISTANCE KINASE LR10-RELATED 8 415 IPR045874 GO:0004672
Tsu07g02383 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Tsu07g02383 418 PANTHER PUTATIVE-RELATED 8 415 - -
Tsu07g02383 418 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Tsu07g02383 418 CDD STKc_IRAK 84 350 - -
Tsu07g02383 418 ProSiteProfiles Protein kinase domain profile. 78 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02383 418 Gene3D Phosphorylase Kinase; domain 1 52 154 - -
Tsu07g02383 418 SMART serkin_6 78 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02383 Tsu-Chr7 27165896 27167240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02383 67 366 Receptor kinase-like Gene Family AT5G38280 41.214 4.73e-77 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Tsu07g02383 Pkinase 8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02383 - - gmx:100803355 659.833