Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02382 ATGGATAAATTTCTGAACGACATGGAAAGGGAGAAGCCGATAAGATTCAGTGGTCTGGAACTAAGAATCGCAACAGACAAATACTCCAACTTGTTGGGATCCGGTGGATTTGGAACAGTTTACAAAGGAATTGTCAGTAATGGAACAATGGTAGCTGTGAAGGTTCTACGCGGTAGTTCTGGCAAGAAAATTGACGAACAATTTACGGCAGAAGTTAGAACAATTGGTAGAATTCATCACATCAATCTTGTTAGGTTATATGGATTTTGCTTTGAAAGAAATTTGATAGCACTTGTTTATGAATACATGGGGAATGGATCACTTGATAGGtatttatttgatgataaaaagGCGTTAGGATACGAAAAGCTTCATGAGATTGCAATTGGTACGGCAAGAGGCATTGCTTACTTGCATGACGAGTGCCAACAAAGAATAATCCACTATGATATAAAACCGGAAAATATTCTCTTAGATAAGAATTTCAATCCTAAAGTCGCTGATTTTGGCTTGGCCATACTTTGTAACAGGGAAAATACTCACATAACGATGACAAGAGGAAGAGGGACGCCTGGTTACGCCGCACCTGAACTTTGGATGCCATTTCCAATAACTCACAAATGTGATGTTTATAGTTTTGGTATGCTATTATTTGAAATAGTCGGTAGGAGAAGAAACCTTGACACTAAGAATACTGGAAGTCAAGAGTGGTTTCCAATTTGGGTTTGGAAAAAATTTGATGCTGGATTATTGGAGGAGGCAATGATAGTTTGTGGAATAGaggagaaaaataaagagattgCTGAGAGAATGGTTAAGATAGCTTTATGCTGTGTTCAATATAGGCCAGAATTAAGGCCTATAATGAGTGTTGTGGTAAAAATGTTGGAAGGTGCATTAGAAATTCCAAAGATTTTTAACCCATTTCAGTATTTGATGGATGGGGCTAATTTTGCTACTCATTCTGTCCAAGTGACAAATACATATACAACTACTGTTTCTTCCTCTGCCTCTTCTGTTATGGTAAGTGATTCCAATATTGTATGTGCTACTCCTATTATGAAGAATTATGAGATTGAATTAACATCCAGCATAGCATGA 1101 0.3633 MDKFLNDMEREKPIRFSGLELRIATDKYSNLLGSGGFGTVYKGIVSNGTMVAVKVLRGSSGKKIDEQFTAEVRTIGRIHHINLVRLYGFCFERNLIALVYEYMGNGSLDRYLFDDKKALGYEKLHEIAIGTARGIAYLHDECQQRIIHYDIKPENILLDKNFNPKVADFGLAILCNRENTHITMTRGRGTPGYAAPELWMPFPITHKCDVYSFGMLLFEIVGRRRNLDTKNTGSQEWFPIWVWKKFDAGLLEEAMIVCGIEEKNKEIAERMVKIALCCVQYRPELRPIMSVVVKMLEGALEIPKIFNPFQYLMDGANFATHSVQVTNTYTTTVSSSASSVMVSDSNIVCATPIMKNYEIELTSSIA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02382 366 SMART serkin_6 26 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02382 366 Pfam Protein kinase domain 30 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02382 366 CDD STKc_IRAK 32 298 - -
Tsu07g02382 366 Gene3D Transferase(Phosphotransferase) domain 1 103 306 - -
Tsu07g02382 366 Gene3D Phosphorylase Kinase; domain 1 3 102 - -
Tsu07g02382 366 SUPERFAMILY Protein kinase-like (PK-like) 11 297 IPR011009 -
Tsu07g02382 366 PANTHER PUTATIVE-RELATED 1 362 - -
Tsu07g02382 366 ProSiteProfiles Protein kinase domain profile. 26 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02382 366 ProSitePatterns Protein kinases ATP-binding region signature. 32 54 IPR017441 GO:0005524
Tsu07g02382 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Tsu07g02382 366 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 362 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02382 Tsu-Chr7 27161755 27162855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02382 15 314 Receptor kinase-like Gene Family AT5G38280 41.214 2.52e-78 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Tsu07g02382 Pkinase 6.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02382 - - gmx:100803355 585.489