Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02376 atgagttttcactatCAATTTCCTGATTCTCCTCCTACCTTTTATTCTTCATCATCAGACAATTTTGACTCACAAGCTCAAAAAACTTTTGACAGATTTGGTGATAGTGTTGATTCTACTATGAAATGGGCTGTAGCAGAATCCGTAGTATATGGAGTAGTGGTAATAATTGCTGTTACAGCAATAGTATATGCTATTATTCAGTGCTTGAAGAAAGCAGGAACAGCAATTCCAGCTTACACTCAGATTTCAACCACAGAAAAGGATAATCAAATATCTTCAAACTCATCATTACCTTCAACCAACAAAATTGAAGTTATAATACCACAAGATTCAAAATCTGAATTTCCAACCATGGAAAGATTCGTAAGCAACATAAATAGAGAGAAACCGATTAGATTCACACCTGAAAAACTCGATGAAATTACGAAAAGATACTCAACCATATTAGGTTCTGGTGCTTTCGGTGTTGTCTTCAAAGGAGAGTTATCAAATGGAGAAAATGTTGCTGTCAAAGTTCTAAACTATTTGGATATGGGAATGGAAGAGCAATTTAAAGCAGAAGTTAGCACAATTGGAAGAACTTATCATAATAATTTAGTCAAACTTTTTGGATTCTGCTTTCACCACACAAGAGCACTTGTTTATGAGTATGTTGAAAATGGTTCTTTAGATAAGTACTTATTTGGAAGCACGAATCGTGAAGTTGAGTTACGAAAGCTTCATGAGATTGCAATTGGAACGGCTAAAGGAATTGCTTATTTACATGAGGAATGTCAACATAGAATAATCCATTATGATATCAAACCCGAAAATGTTCTTCTTGACATGAATTTAGTACCAAAGATAGCTGATTTTGGATTAGCAAAGTTAAGAAGTAGAGAAAGTAAAATTGTTATAAATACTCACTTTAGAGGAACAAAAGGTTACGCCGCACCTGAAATGTGGAAGGCTTATCCAGTGACATATAAATGCGATGTTTATAGTTTCGGTATTCTTCTATTTGAAATCGTAGGGAGAAGAAGACATTTTAATTCGAGCTATAGTGAATCACAACAATGGTTTCCAAAATGGACTTGGGAAATGTATGAGAATAATGAATTGGTTGTTATGCTTGCGCTTTGTGGAATTGAAGAGAAAGATAACGAGAGAGCCGAGAGAATGTTAAAGGTTGCTCTATGGTGTGTTCAATATTCACCAAATGATAGGCCTCAAATGAGTACTGTTGTGAAGATGTTAGAAGGTGAAATAGAAATTTCTTCACCTCCATTTCCCTTTCAAAATCTTGTGCCGGCGGCTAAAGAAAATTTGACGACAGAAGGAAGCATTGCAGATTCTGATACAACTACATCTTCATGGAATACAGAATCTTTAAGAGAATTTGGTTTAAGAACCAAACACAATGCATTTGAGATCGAAACATGTTTGGAATGA 1434 0.3459 MSFHYQFPDSPPTFYSSSSDNFDSQAQKTFDRFGDSVDSTMKWAVAESVVYGVVVIIAVTAIVYAIIQCLKKAGTAIPAYTQISTTEKDNQISSNSSLPSTNKIEVIIPQDSKSEFPTMERFVSNINREKPIRFTPEKLDEITKRYSTILGSGAFGVVFKGELSNGENVAVKVLNYLDMGMEEQFKAEVSTIGRTYHNNLVKLFGFCFHHTRALVYEYVENGSLDKYLFGSTNREVELRKLHEIAIGTAKGIAYLHEECQHRIIHYDIKPENVLLDMNLVPKIADFGLAKLRSRESKIVINTHFRGTKGYAAPEMWKAYPVTYKCDVYSFGILLFEIVGRRRHFNSSYSESQQWFPKWTWEMYENNELVVMLALCGIEEKDNERAERMLKVALWCVQYSPNDRPQMSTVVKMLEGEIEISSPPFPFQNLVPAAKENLTTEGSIADSDTTTSSWNTESLREFGLRTKHNAFEIETCLE 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02376 477 ProSitePatterns Protein kinases ATP-binding region signature. 150 172 IPR017441 GO:0005524
Tsu07g02376 477 SUPERFAMILY Protein kinase-like (PK-like) 124 414 IPR011009 -
Tsu07g02376 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Tsu07g02376 477 SMART serkin_6 144 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02376 477 PANTHER RECEPTOR SERINE/THREONINE KINASE 101 455 - -
Tsu07g02376 477 Gene3D Phosphorylase Kinase; domain 1 118 218 - -
Tsu07g02376 477 Gene3D Transferase(Phosphotransferase) domain 1 219 421 - -
Tsu07g02376 477 Pfam Protein kinase domain 148 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02376 477 PANTHER RUST RESISTANCE KINASE LR10-RELATED 101 455 IPR045874 GO:0004672
Tsu07g02376 477 ProSiteProfiles Protein kinase domain profile. 144 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02376 Tsu-Chr7 27101166 27104718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02376 133 454 Receptor kinase-like Gene Family AT5G38280 39.697 3.66e-79 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Tsu07g02376 Pkinase 5.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02376 - - gmx:100820269 632.869