Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02375 ATGGAAAGGGAGAAGCCAATAAGATTCAGTAGTCAACAACTAAAGATTGCAACAGAAAATTATTCAAACTTGTTAGGGTCAGGTGGATTTGGAACAGTTTACAAAGGAATTTTCAGTAATGGAACAATGGTAGCTGTGAAGGTTCTACGCGGTAGTTCCGGCAAGAAGATTGATGAACAATTTATGGCCGAAGTTGGAACAATCGGTAGAATTCATCACTTCAATCTTGTTAGGCTATATGGATTTTGCATTGAAAGAAACTTGATAGCACTAGTTTATGAATATATGGAGAATGGATCACTTGATATGTATTTGTTTCATGAAAAAAATTGCTTAGGATATGAAAAGCTTCATGAGATTTCAATTGGTACCGCAAGAGGCATTGCTTACTTGCATGAAGAATGCCAACATAGAATAGTCCACTATGATATAAAACCGGGAAATATTCTATTGGATTGGAATCTCAATCCTAAAGTCGCGGATTTTGGTTTGGCAAAACTTTGTAACAGGGAAAATACTCACATAACGATGACCGGAGGAAGGGGTACACCTGGTTATGCCGCACCTGAGCTTTGGATGCCATCTCCTATAACTTATAAATGCGATGTTTATAGTTTTGGCATGTTATTATTTGAAATTATCGGTAGGAGAAGAAATCTTGACATTAAAAATACCGAAACCGAAGAGTGGTTTCCAATTTGGGTTTGGAAAAAATTTGATGCTGGATTATTGGAGGAAGCAATGATAGAGTGTGGAATAGAGGAGAAAAATAAGGAGATTGTTGAGAGAATGGTGAAAGTAGCTTTATGGTGTGTTCAATATAAGCAAGAATTAAGACCTATGATGAGTGTTGTGGTGAAAATGTTGGAAGGTTCATtacaaattccaaaaatatttaATCCATTTCGAAATttaattgatggtactaatttTGCTATTCATCCTGTGGAAGTGTCAGATGTTTATACAACTAGTGTGTCTTCTTTTGACTCTTCTGTTATGGTGAGTGATTCCAATATTGGATGTGCTACTCCTATTATGAAGAAATATGAGATTGAATTGATATCTAATATATTGTGA 1080 0.3463 MEREKPIRFSSQQLKIATENYSNLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSGKKIDEQFMAEVGTIGRIHHFNLVRLYGFCIERNLIALVYEYMENGSLDMYLFHEKNCLGYEKLHEISIGTARGIAYLHEECQHRIVHYDIKPGNILLDWNLNPKVADFGLAKLCNRENTHITMTGGRGTPGYAAPELWMPSPITYKCDVYSFGMLLFEIIGRRRNLDIKNTETEEWFPIWVWKKFDAGLLEEAMIECGIEEKNKEIVERMVKVALWCVQYKQELRPMMSVVVKMLEGSLQIPKIFNPFRNLIDGTNFAIHPVEVSDVYTTSVSSFDSSVMVSDSNIGCATPIMKKYEIELISNIL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02375 359 ProSitePatterns Protein kinases ATP-binding region signature. 25 47 IPR017441 GO:0005524
Tsu07g02375 359 Gene3D Transferase(Phosphotransferase) domain 1 96 298 - -
Tsu07g02375 359 Pfam Protein tyrosine and serine/threonine kinase 23 289 IPR001245 GO:0004672|GO:0006468
Tsu07g02375 359 PANTHER PUTATIVE-RELATED 1 355 - -
Tsu07g02375 359 SMART serkin_6 19 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02375 359 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 355 IPR045874 GO:0004672
Tsu07g02375 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Tsu07g02375 359 SUPERFAMILY Protein kinase-like (PK-like) 6 290 IPR011009 -
Tsu07g02375 359 ProSiteProfiles Protein kinase domain profile. 19 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02375 359 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02375 Tsu-Chr7 27099110 27100189 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02375 8 307 Receptor kinase-like Gene Family AT5G38280 41.214 1.92e-75 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Tsu07g02375 PK_Tyr_Ser-Thr 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02375 - - gmx:100803355 578.941