Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02374 ATGTCAAGCAGTGGTGGTGGTTATGATGGGTCAAGcagtggtggtggtgatgatgttAATATTGGACTTGTGGTTGTTCTAGCCTTAGTAGTAGTTGCTGTAAAGGTAGGTATTTTGGTTTGTGTTTGCAGGAGAATATTCCCAGAAAAATTTGCAAGAACTATTAGAACAGATTCACAAATCCTAACGTTAACAGTCACTATAGATAATTTTCTCAACAACATGGAAAGGGAAAAGCCAGTAAGATTCACTAGTCAACAACTAAGAATTGCAACAGACAATTACTCCAACTTGTTGGGGTCAGGTGGATTTGGAACAGTTTATAAAGGAATTTTCAATAACAGAACAATGGTAGCTGTGAAGGTTCTACGTGGAAGTTCTTATAAGAAAATTGAGGAAACATTTATGGCTGAAGTTGGAACAATTGGTACAATTCATCACTTCAATCTTGTTAAGTTATATGGATTTTGCTTTGAAAGAGATTTGGTAGCACTTGTTTATGAATACATGGGAAATGGATCACTTGATAAGTATTTGTTtcatgaaaaaaatgttttaggATATGAAAAGCTTCACGAGATTGCAATTGGTACTGCAAAAGGCATTGCTTACTTGCATGAAGAGTGTCAACATAGAATTGTGCACTACGATATAAAACCCGGAAATATTCTCTTGGATAAGAATTTCTATCCTAAAGTAGCTGATTTTGGTTTGGCCAAACTTTGCAACAGGGAAAATACTCACATAACGATGACTGGAGGAAGGGGGACGCCTGGTTACGCCGCACCTGAGCTTTGGATGCCGTTTCCTATAACTCACAAATGTGATGTTTATAGTTTTGGTATGCTATTATTTGAAATTATCGGTAGACGAAGAAACCTTGACATTAAGAATACTGAAAGCCAAGAGTGGTTTCCAATTTGGGTTTGGAAAAAATTTGATGCTGGACTATTGGAAGAGGCAATTGTAATTTGTGGAATAGaggagaaaaataaagagattgCTGAGAGAATGGTTAAGACAGCTATATGGTGTGTTCAATATAGGCAAGAATTAAGGCCTATGATGAGTGAGATTGTGAAAATGTTAGAAGGATCATTAGAAATTCCAAAGACAATTAACCCATTTCAACATTTGATTGATGGAACTTTTGCTACTCATTCAGTGCAAGAGTCAAGTACTTGGACAGCTAGTGTTTCTACTGTTATGGCAATTGAGTCCAACATTGTATGCGATGATACTCCTATTATGAGGAAGTATGAGATTCAATTGGCTAGCACATGA 1284 0.3489 MSSSGGGYDGSSSGGGDDVNIGLVVVLALVVVAVKVGILVCVCRRIFPEKFARTIRTDSQILTLTVTIDNFLNNMEREKPVRFTSQQLRIATDNYSNLLGSGGFGTVYKGIFNNRTMVAVKVLRGSSYKKIEETFMAEVGTIGTIHHFNLVKLYGFCFERDLVALVYEYMGNGSLDKYLFHEKNVLGYEKLHEIAIGTAKGIAYLHEECQHRIVHYDIKPGNILLDKNFYPKVADFGLAKLCNRENTHITMTGGRGTPGYAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNLDIKNTESQEWFPIWVWKKFDAGLLEEAIVICGIEEKNKEIAERMVKTAIWCVQYRQELRPMMSEIVKMLEGSLEIPKTINPFQHLIDGTFATHSVQESSTWTASVSTVMAIESNIVCDDTPIMRKYEIQLAST 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02374 427 ProSitePatterns Protein kinases ATP-binding region signature. 99 121 IPR017441 GO:0005524
Tsu07g02374 427 Gene3D Transferase(Phosphotransferase) domain 1 170 375 - -
Tsu07g02374 427 Gene3D Phosphorylase Kinase; domain 1 68 169 - -
Tsu07g02374 427 ProSiteProfiles Protein kinase domain profile. 93 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02374 427 PANTHER PUTATIVE-RELATED 28 422 - -
Tsu07g02374 427 Pfam Protein tyrosine and serine/threonine kinase 97 363 IPR001245 GO:0004672|GO:0006468
Tsu07g02374 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Tsu07g02374 427 PANTHER RUST RESISTANCE KINASE LR10-RELATED 28 422 IPR045874 GO:0004672
Tsu07g02374 427 SMART serkin_6 93 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02374 427 SUPERFAMILY Protein kinase-like (PK-like) 74 364 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02374 Tsu-Chr7 27095153 27096552 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02374 83 396 Receptor kinase-like Gene Family AT5G39030 42.154 1.00e-72 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Tsu07g02374 PK_Tyr_Ser-Thr 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02374 - - gmx:100803355 626.32