Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02372 ATGAATCAGACCGGCGGAGGTCATGACGGTACCGGACCCAAAATAAGGGTTGTAGTCAACCAATTCACAACAGACTTGACTAATACTTGTGGAATCATTCCATTACTCTCTTATTGTCATGGTGACACTGCAGTTGTGGACGTTTTTCTAGCCTCAGTAGTAATTTTAGCTATTTTGATTTGTGTGTGTAGAAGAAAAAGACATAAAGTTAGTGATGATGGGTCCATTGATCCAGATTCACAAATTCTAAATGATACTATAGataattttcttaataacaTGAAAATGGAAAAGCCAATAAGATTCACTAGTCAACAACTAAGAACTGCAACAGGCAATTACTCCAACTTGTTGGGGTCAGGTGGATTTGGAACAGTTTTCAAAGGAATTTTCAATAATGGAACAATGGTAGCTGTGAAGGTTCTATGTGGAAGTTCTgataagaaaattgaagaacaaTTTATGGCTGAAGTTGGAACAATTGGTAGAATTCATCACTTCAATCTTGTTAAACTATATGGATTTTGCTTTGAAAGAAACTTGGTAGCACTTGCTTATGAATTCATGGCAAATGGATCGCTTGATAAGTATTTgtttcatgaaaaaaaattattaggatATGAAAAGCTTCATGAGATTGCGATTGGTACAGCAAGAGGCATTGCTTACTTGCATGAAGATTGCCAACATAGAATAATCCACTATGATATAAAACCGGGCAATATTCTCTTGGATGTGAATTTCAATCCTAAAGTTGCAGATTTTGGTTTGGCGAAACTTTGTAACCGGGATAATAGTCACATAACAATGACCGGAGGAAGGGGGACACCCGGTTATGCTGCACCTGAGCTTTGGATGCCATTTCCTATAACTCACAAATGCGATGTTTATAGTTTTGGTATGCTATTATTTGAAATTATTGGTAGAAGAAGAAACATTgacattgaaaataatgaaagcCAAGAGTGGTTTCCGATTTGGGTTTGGAAAAAATTTGATGCTGGACTATTGGAGGAGGCGATGATAGTTTGTGGAATAGaggagaaaaataaagagattgCTGAGAGAATGGTTAAGATAGCTTTAAGGTGTGTTCAATATAGGCAAGAATTAAGGCCTATGATGAGTGAGGTAGTGAAAATGTTGGAAGGTTCATTAGAAATTCCAAAGAGTTTTAACCCATTTCAACATTTGATTGATGGAACTTTTGCTACTCATTCAGTGCAAGAGACAAATACTTGTACAACTAGCGTTTCTTCTGTTATGATAAGGAGGCCTCAAGGTCTTAGGAGGGCTTCCGGTTGGTGGAGGAACATGTCCTTATTAGGAGACCCTGTAGATGCTAGCTCACATTGGTTTTCAGAGGTGGTGACTAAAACTGTTGGTAATGGTCTCATGACTTCTTTCTGGTTTGATCCTTGGGTGGGGGAAACACCTTTAAGGATCCAATTTCAAAGACTTTTTCAAGTTTCGGCCTAG 1479 0.359 MNQTGGGHDGTGPKIRVVVNQFTTDLTNTCGIIPLLSYCHGDTAVVDVFLASVVILAILICVCRRKRHKVSDDGSIDPDSQILNDTIDNFLNNMKMEKPIRFTSQQLRTATGNYSNLLGSGGFGTVFKGIFNNGTMVAVKVLCGSSDKKIEEQFMAEVGTIGRIHHFNLVKLYGFCFERNLVALAYEFMANGSLDKYLFHEKKLLGYEKLHEIAIGTARGIAYLHEDCQHRIIHYDIKPGNILLDVNFNPKVADFGLAKLCNRDNSHITMTGGRGTPGYAAPELWMPFPITHKCDVYSFGMLLFEIIGRRRNIDIENNESQEWFPIWVWKKFDAGLLEEAMIVCGIEEKNKEIAERMVKIALRCVQYRQELRPMMSEVVKMLEGSLEIPKSFNPFQHLIDGTFATHSVQETNTCTTSVSSVMIRRPQGLRRASGWWRNMSLLGDPVDASSHWFSEVVTKTVGNGLMTSFWFDPWVGETPLRIQFQRLFQVSA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02372 492 Gene3D Transferase(Phosphotransferase) domain 1 189 393 - -
Tsu07g02372 492 Pfam Protein tyrosine and serine/threonine kinase 116 382 IPR001245 GO:0004672|GO:0006468
Tsu07g02372 492 ProSitePatterns Protein kinases ATP-binding region signature. 118 140 IPR017441 GO:0005524
Tsu07g02372 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Tsu07g02372 492 PANTHER PUTATIVE-RELATED 44 398 - -
Tsu07g02372 492 ProSiteProfiles Protein kinase domain profile. 112 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02372 492 Gene3D Phosphorylase Kinase; domain 1 85 188 - -
Tsu07g02372 492 SMART serkin_6 112 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02372 492 SUPERFAMILY Protein kinase-like (PK-like) 88 383 IPR011009 -
Tsu07g02372 492 PANTHER RUST RESISTANCE KINASE LR10-RELATED 44 398 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02372 Tsu-Chr7 27080678 27084897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02372 101 400 Receptor kinase-like Gene Family AT5G38280 41.534 2.49e-73 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Tsu07g02372 PK_Tyr_Ser-Thr 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02372 - - gmx:100803355 595.504