Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02358 aTGGAAGGCCAAAAAAATAAACGCAAACGCGTTTATTCGGTTGAACCAAACAAAGTAGTGCAAACAAAATTTACTAGAAACTATATTAACTATTTAGCGCCAGCTTTAATGAAGATCAAGGAAAGAAGAAGTTCTATAGAAACCAAGAATGTTGAAAATGTTGTCAAGTATGAAGTTGACATGGCAATGGTTTTTTCATCTCAAGGTTTTGCTTGGAGCAATGCTTTAAAATTGAAGCTTCAAAAAGATGGTGGTGAAGGTTCATCAAGAattaattatcaacaaaatGAAATGGGCCCACTTGATTTTTCTaagaaaaattgttcaaaatttgAGGCTAGTAAGATTTTAGTGGGAAAgaatttgattgaagaaaatgattatgatgaagatgatattGTGGATGACCAATTGAGGTGTCTTAGAAAATTGATTCCAGGAGGAGAAGAGATTATGTGTGATGATCAAATGGTTAGTGAATTAGAGAGCTATGTAAGTTGTTTGCAAATGCAAGTGAATATTCTAAAGTGTCTCACTGATTAG 543 0.3002 MEGQKNKRKRVYSVEPNKVVQTKFTRNYINYLAPALMKIKERRSSIETKNVENVVKYEVDMAMVFSSQGFAWSNALKLKLQKDGGEGSSRINYQQNEMGPLDFSKKNCSKFEASKILVGKNLIEENDYDEDDIVDDQLRCLRKLIPGGEEIMCDDQMVSELESYVSCLQMQVNILKCLTD 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02358 180 CDD bHLH_AtIBH1_like 137 179 IPR044549 GO:0006355
Tsu07g02358 180 PANTHER TRANSCRIPTION FACTOR BHLH146 3 179 - -
Tsu07g02358 180 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 179 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02358 Tsu-Chr7 26949285 26950040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02358 6 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 33.333 1.35e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02358 - - aprc:113852314 194.126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04596 04 53503306 53503932 Tsu07g02358 07 26949285 26950040 PCT