Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02355 ATGAGGACTATACGCAATCACACGAAGAGAAGGAATCTGAATTTTTTCTCATGTGGGACTGAAAATCCAATGGATGACTGCTGGCGCTGTGACAAGCATCGGGCCTTCCGGCGAAAGAGGTTAGCCGATTGTGCCATTGGTTTTGGTCACAAAGCAATTGGTTGGCGCGATGGAAGGTACTATGCTGTGACAGACCCTAATGACGACGACCCAGTGAACCCAATACCAGGGACTCTCCGTCATGCTGTCATTCAAGACAGGCCATTGTGGATTGTATTCAAGAAAGACATGGTGATCACCCTAAAGCAATAA 312 0.4744 MRTIRNHTKRRNLNFFSCGTENPMDDCWRCDKHRAFRRKRLADCAIGFGHKAIGWRDGRYYAVTDPNDDDPVNPIPGTLRHAVIQDRPLWIVFKKDMVITLKQ 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02355 103 SUPERFAMILY Pectin lyase-like 22 102 IPR011050 -
Tsu07g02355 103 PANTHER PECTATE LYASE 18-RELATED 5 103 IPR045032 GO:0030570
Tsu07g02355 103 PANTHER PECTATE LYASE 5 103 - -
Tsu07g02355 103 Gene3D - 21 103 IPR012334 -
Tsu07g02355 103 PRINTS Pollen allergen Amb family signature 68 93 IPR018082 -
Tsu07g02355 103 PRINTS Pollen allergen Amb family signature 44 61 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02355 Tsu-Chr7 26892365 26892813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02355 2 103 Polysaccharide Lyase AT3G07010 76.471 1.72e-54 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02355 K01728 - gmx:100790659 173.326