Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02330 ATGGCAGAGCGTGTGTTACTCACTCCTTCACTACCTTTACCATCTCGATCTTCACCAACCGCAACAATGGCTACTATTACTGGCGGCGCCGCCGTTCGCATAATCCCCTCCGCTACTAGAGCCACCGTCTCACTCTCCTCTTCTTCCCGTTCCTTTTTCTCATTTTCATCCTCTTCAAATTCCGTTTCCTCGCTCAACTGCTTGCGGTCTTCTCCTCGCATTTCTCATCTGTTTCTCGACCAGCGAAGATCAGAAGTTCGTGTTTCGAGTGGACGATTTGGAACGGTTTCTAATCCGAAAGCGTTTGCGTCTGATCCTGATCAGTTGAAGAGTGCTAGAGAAGATATCAAGGAGCTTCTCAAGACTAAGTTCTGTCATCCTCTTTTGattcgtTTGGGATGGCATGATGCTGGTACTTATAATAAGAATATCGAGGAGTTTCCACAAAGAGGCGGAGCCAATGGTAGCTTAAGATTTGAAGCTGAGTTGAAACATGGAGCCAATGCTGGACTTGTAAATGCATTGAAACTTCTCCAGCCAATCAAAGACAAATATTCAGGCGTGACATATGCTGACTTATTTCAGTTAGCTGGTGCTACTGCTGTGGAGGAAGCTGGAGGCCCAAAAATTCCCATGAAATATGGAAGAGTAGATGTCACTGGACCTGAACAATGCCCCGAAGAAGGGAGACTTCCTGatgCAGGCCCCCCTTCACCTGCTGATCATTTGCGCCAAGTTTTCTATCGAATGGGGTTGAACGACAAGGAAATTGTTGCATTATCTGGTGCGCACACACTGGGGCGGTCTAGACCAGACCGTAGTGGCTGGGGCAAACCTGAGACTAAATACACGAAAGATGGGCCAGGAGCACCTGGAGGACAATCTTGGACTGCACAATGGTTAAAATTTGACAACTCTTACTTCAAGGAcatcaaagaaaaaaaggatGAAGATCTATTGGTCTTACCAACTGATGCTGCTCTTTTTGACGATCCTTCCTTCAAGGTATATGCTGAGAAATATGCTGAAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCACATGCCAAACTCAGCAACCTTGGAGCCAAATTTGATCCTCCAGAGGGTATTGTACTAGATGGTTCTCCAAACGCAGTGGGAGAGAAGTTTGTAGCAGCCAAGTACTCCTCTGGAAAGAAAGAGCTGTCTGATGCTATGAGGAAGAAGATACGGGCTGAATATGAGGCGGTTGGTGGAAGCCCAGATAAGGCTCTAAAGTCGAACTATTTTCTAAACATCATCATTGTTATTGCTGTTTTGGCTATTTTGACATCCCTGCTTGGAAACTAA 1335 0.4487 MAERVLLTPSLPLPSRSSPTATMATITGGAAVRIIPSATRATVSLSSSSRSFFSFSSSSNSVSSLNCLRSSPRISHLFLDQRRSEVRVSSGRFGTVSNPKAFASDPDQLKSAREDIKELLKTKFCHPLLIRLGWHDAGTYNKNIEEFPQRGGANGSLRFEAELKHGANAGLVNALKLLQPIKDKYSGVTYADLFQLAGATAVEEAGGPKIPMKYGRVDVTGPEQCPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGAPGGQSWTAQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFDDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDGSPNAVGEKFVAAKYSSGKKELSDAMRKKIRAEYEAVGGSPDKALKSNYFLNIIIVIAVLAILTSLLGN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02330 444 MobiDBLite consensus disorder prediction 263 295 - -
Tsu07g02330 444 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 397 444 IPR044831 GO:0004601|GO:0034599
Tsu07g02330 444 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 22 379 IPR044831 GO:0004601|GO:0034599
Tsu07g02330 444 Gene3D Peroxidase, domain 2 234 357 - -
Tsu07g02330 444 ProSiteProfiles Plant heme peroxidase family profile. 129 383 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g02330 444 Pfam Peroxidase 113 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g02330 444 Gene3D - 112 365 - -
Tsu07g02330 444 ProSitePatterns Peroxidases proximal heme-ligand signature. 256 266 IPR019793 -
Tsu07g02330 444 PRINTS Plant ascorbate peroxidase signature 105 125 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu07g02330 444 PRINTS Plant ascorbate peroxidase signature 126 141 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu07g02330 444 PRINTS Plant ascorbate peroxidase signature 187 205 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu07g02330 444 PRINTS Plant ascorbate peroxidase signature 206 218 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu07g02330 444 PRINTS Plant ascorbate peroxidase signature 325 349 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu07g02330 444 SUPERFAMILY Heme-dependent peroxidases 103 365 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu07g02330 444 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 22 379 - -
Tsu07g02330 444 PANTHER L-ASCORBATE PEROXIDASE 8, CHLOROPLASTIC-RELATED 397 444 - -
Tsu07g02330 444 CDD ascorbate_peroxidase 101 367 - -
Tsu07g02330 444 PRINTS Haem peroxidase superfamily signature 126 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g02330 444 PRINTS Haem peroxidase superfamily signature 188 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g02330 444 PRINTS Haem peroxidase superfamily signature 206 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g02330 444 PRINTS Haem peroxidase superfamily signature 256 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g02330 444 PRINTS Haem peroxidase superfamily signature 296 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02330 Tsu-Chr7 26376102 26383302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02330 129 359 Peroxidase AT2G18140 28.947 3.33e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02330 K00434 - zju:107421087 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02330 07 26376102 26383302 Tsu07g02330 07 26376102 26383302 ECH