Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02324 ATGGCATCCGAGCTTCAATTGCCACCGGGCTTCAGATTTCATCCTACGGATGAAGAGCTCGTGATGCACTATCTCTGTCGGAAATGCACTTCCCAGCCTATCGCCGTTCCGATCATCGCCGAAATTGATCTCTATAAATATGATCCTTGGGACCTTCCTGGTATGGCTTCTTATGGAGAAAAGGAGTGGTACTTTTTCTCGCCACGAGACAGGAAATATCCGAACGGTTCAAGGCCGAACCGGGCGGCTGGGTCTGGATATTGGAAGGCAACCGGGGCGGATAAACCCATAGGTCATCCTAAACCGGTTGGGATCAAAAAAGCGTTGGTGTTTTACGCGGGTAAAGCACCCAAAGGTGATAAAACCAATTGGATCATGCATGAATATCGTTTGGCTGACGTAGATCGCTCCATTCGCAAAAAGAACAGCTTAAGgTTGGATGATTGGGTGCTTTGCCGTATTTACAACAAGAAGGGTACTATCGAGAAACAACCAAGCAGCGGTGTTGCTAGCCGGAAAATTGAACACTCAGAGTTTGAAGACAAGAAGCCAGAGATTTTGACACGCGGAGGCGGTCTTCCACCGCATCCTCCACCTCAAACAGCGGCAGGAATTAGGGATTACATGTATTTTGACACCTCGGATTCGATTCCAAAACTGCACACGGACTCGAGCTGTTCGGAACACGTAGTGTCGCCAGAGTTTGCTACTGAGGTGCAAAGCGAGCCTAAGTGGAACGAGTGGGAAAAGAACCTTGAATTTCCTTATAATTACATGGATGCCACTCTTAACAGTGGTTTTGGATCTCAATTTCAGACCAATAATCAGATGTCTCCTTTGCAGGATATGTTCATGTACCTGCCCAAATCTTTTTGA 876 0.4703 MASELQLPPGFRFHPTDEELVMHYLCRKCTSQPIAVPIIAEIDLYKYDPWDLPGMASYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGDKTNWIMHEYRLADVDRSIRKKNSLRLDDWVLCRIYNKKGTIEKQPSSGVASRKIEHSEFEDKKPEILTRGGGLPPHPPPQTAAGIRDYMYFDTSDSIPKLHTDSSCSEHVVSPEFATEVQSEPKWNEWEKNLEFPYNYMDATLNSGFGSQFQTNNQMSPLQDMFMYLPKSF 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02324 291 MobiDBLite consensus disorder prediction 166 199 - -
Tsu07g02324 291 MobiDBLite consensus disorder prediction 173 187 - -
Tsu07g02324 291 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Tsu07g02324 291 PANTHER NAC TRANSCRIPTION FACTOR 56 2 269 - -
Tsu07g02324 291 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Tsu07g02324 291 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Tsu07g02324 291 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 2 269 - -
Tsu07g02324 291 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02324 Tsu-Chr7 26336190 26338741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02324 1 291 NAC Transcription Factor Family AT1G01720 70.333 8.61e-149 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu07g02324 NAM 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02324 - - gmx:100805768 525.398