Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02305 atGGCCACCGCAATGACTTGGAGATTTTCCGGCAACAATGGCACCACCCTTGCTTCTAATGATTTGGAAAGAAATGGTAATGGCAAGGCTCAAGATTCAGACGCTCCAACTCCCCATTCTGTTCCGAAAATGGGATTGAGAGAACGTAACAGCAGCGGGATGGAGGATGCAGATGGGACATTAGCAAGTATTGCCCAATGCATTGAGAAGCTACGTCAGAGCTCATCTTCTATGCAAGAGAAAGAGTATTCCTTGAAGCAATTATCGGAGCTTATTGATACACGTGAAAATGCCTTTAGTGCAGTTGGATCTCATTCTCAAGCAGTTCCGGTGCTTGTTTCCCTTCTCCGGTCAGGGTCATTGAATGTGAAGATACAGGCAGCAACTGTCTTGGGCTCACTTTGTAAAGAAAATGAGTTAAGGGTGAAAGTCTTGCTTGGAGGATGTATTCCTCCTTTGCTCGGTCTACTAAAGTCCAGTTCTGAAGAAGGTCAAGTATCTGCTGCAAAGACAATTTTTGCTGTCTCTCAAGGTGATGCCAAAGATCATGTTGGATCAAAAATCTTTTCTACTGAAGGAGTTGTTCCAGTGCTCTGGGAACAGCTGCAAAAGGGCCTAAAGAGTGGAAGTGTAGTAGATAGTTTACTGACTGGAGCATTGAAAAATCTCTACAGCAGTACTGAGAGATTCTGGAATTCGACAATACAGGCTGGAGGAGTGGACATATTGCTGAAGTTACTGACAACAGGACAGTCTAGCACTTTAGCTAATGTGTGCTTTTTACTTGCCTGTATGATGATGGAAGATGCATCTTTTTGTTCAAAGGTATTGACAGCAGATGCAACGAAACAACTCCTCAAACTTTTAGGCCCTGGTAATGATGCCCCAGTTAGAGCTGAAGCAGCTGGTGCTCTTAAATCTCTATCAGCCCAGTGCCAAGAAGCAAGGAAAGAGATAGCCAATTCTAATGGTATTCCTGCTTTAATTAATGCTACTATCGCTCCTTCCAAAGAGTTCATGCAAGGTGAGTATGCTCAAGCGATACAGGAGAATGCTATGTGTGCTCTTGCAAACATATCTGGCGGTTTGTCTTATGTCATCTCCAGCCTTGGTCAAAGCCTTGAGTCATGCTCCTCACCGACCCAAAGTGCTGACACATTGGGGGCTTTAGCTTCAGCTCTTATGATATATGATGACAAGGCAGAATCTACCAGAGCATCAGATCCTTTGGCAGTTGAGCAGACATTACTTGAGCAATTCAAACCACGCTCACCCTTCCTTGTGCAGGAAAGGACCATTGAAGCTCTTGCTAGTTTGTATGGAAATCCTATACTCTCACTTAAACTTGCAAATTCTGATGCAAAGCGTCTGCTTGTCGGTCTAATAACAATGGCCGCTAATGAAGTGCAAGATGAGCTTCTAAAAGCTCTCTTGACACTGTGTAATAGTGAGTGCAGTCTATGGCGTGCACTTCAAGGCCGTGAAGGAGTTCAGCTATTGATATCTCTTTTGGGGCTTTCATCAGAACAGCAACAAGAATGTGCCATTGCCCTGCTCTGTCTCTTGTCTAATGAAAATGATGAAAGTAAATGGGCCATTACTGCTGCTGGTGGTATACCTCCACTTGTTCAGATTTTGGAGTCAGGATCTGCAAAAGCAAAGGAAGACTCGGCAACAATCCTCAGGAACCTATGTGATCACAGTGAGGATATACGTGCTTGTGTTGAAAGTGCTGATGCTGTTCCTGCATTGTTGTGGCTGTTGAAGAATGGAAGCCCAAATGGGAAGGAGATTGCAGCAAAGACCTTGAACCACTTAATTCATAAATCTGATACGGCAACTATCAGTCAGCTTACAGCATTATTGACTAGTGATCTACCTGAGTCTAAGGTTTATGTTTTAGATGCTTTGAGGAGTATGCTTTCTGTTGTTTCTCTTAGTGACCTTCTACGTGAAGGTAGTGCTTCCAGTGATGCGATCAATACAATGATAAAATTATTGAGCTCTACAAAGGAAGAAACTCAGGCAAAGTCAGCATCAGCTTTGTCAGGAATTTTTGAAACAAGGAAAGATTTGAGAGAAAGCAATATTGCTGTTAAAACTCTCCGGTCAGCCATGAAGTTGCTTAATATTGAATCTGGAAGTATCTTAGTGGAGTCCTCACGCTGCCTAGCTGCAATATTTCTTTCCATCAAAGAGAACAGAGAGGTGGCTGCTAATGCTAGTGATGCATTATCCTCCCTAGTTGCACTAGCTAGCTCTTCAGATTTGGAAGTAGCGGAGCTGGCAACATGTGCTGTGGCAAACCTATTTTTGGATAGTGAAATTGCTGAAGATGCTGTTGCGGAGGAAGTTATTTTCCCTGCTACCAGAGTATTGCGTGAAGGCACAAAATCTGGAAAAACACATGCAGCAGCAGCAATCGCTCGCCTTTTGCATTCTAGGCAAGTTGATTATGCTGTAAATGATTGTGTGAATCGTGCCGGTACTGTTCTTGCATTAGTTTCTTTCTTAGGCTCTGTTATTAATGAACCTGTTGCGACAGCAGAGGCTCTAGAAGCACTTGCCATTCTGTCCAGGTTGAAAGAGACCACTGCACTTAGTAAACCTGCTTGGAGGATTTTGGTTGAATTCCCTAAAAGCATAACCCCAGTAGTTCTGTCAATTGCCGATTCAACACCAGTGTTGCAGGATAAAGCTATTGAAATATTATCTCGATTATGTAAGGATCAGCCTTCTGTGTTAGGAGAGACTGTTGCTACTGCATCTGGATGTATATCTTCAATAGCTAAGAGGATCATCAATTCCACTTCTACAAAAATGAAGGTCAAAATTGGGGGAGCTGCAATTCTTATTTGTGCTGCTAAAGAAAATCACCAGAGGCTTGTGGAGGATCTAAATATATCAAACTTGTGTGCTAATCTTGTACAGTCACTTGTTGATATGCTTATTTCTGCACAGGCTACTTTAGTTAACCAGGACGATTTCAACAAGGAAGTCATCAGCATTTGCAGGCATACAAAAGATGCCAATGATGGTAAATCTACGAACATCACCACCATTATATCTGGTGCTGATGTAGCTTTATGGTTACTGTCTGTTCTTGCTTGTCATGAcgaaaaaagtaaaattgcaATAATGGAGGCTGGAGCGATTGAGATTCTCACCGACAGGATTGCAAATTTTTCCTCACAATACAGCCAGATTGACTATAAAGAAGATAGCAGCATGTGGATTTGTGCTATGTTGTTGGCAATATTATTTCAAGATAGGGATATCATACGAGCACATGCAACAATGATATCTATACCAGCCCTTGCCAATTTATTGAAGTCAGAGGAATCAgcaaacaaatattttgctGCACAATCAATAGCTAGCCTAGTCTGTAATGGTAGCAGGGGAACACTTCTATCTGTGGCAAATTCTGGTGTGGCAGGTGGACTTATCTCCTTGCTTGGTTGTGCTGATGTTGATATACAGGATCTTCTGGAATTGTCAAATGAATTTTCATTGCCGCCTTATCCTGATCAAGTTGCTCTTGAGAGGTTGTTTAGAGTTGATGACATTAGAGTTGGTGCCACTTCTCGGAAGGCAATACCTGCCCTAGTTGATCTGCTCAAACCAATTCCAGATCGCCCAGGAGCACCATTTTTAGCACTTGGGATTTTGACTGACCTTGCTAGAGATTGTCCATCAAATAAGATTGTAATGGTAGAGTCTGGGGCCATAGAGGCACTTACCAAGTATCTTTCGCTGGGTCCACAAGATGCAATTGAAGAAGCTGCTACAGATCTGTTAGGAATTTTGTTTAGTAGTGCTGAAATAAGGAAACATGAGTCAGCATTTGGTGCTGTAACTCAACTTGTAGCTGTGCTACGTTTAGGAGGAAGAGCTGCAAGGTATAGTGCCGCCAAAGCCTTGGAAAGTTTATTTTTGGCTGACAACATTAGAAATGCAGAGACAGCCCGACATGCTGTTCAACCCTTGGTGGAGATTCTTAATACTGGTTTAGAGAGAGAGCAACATGCTGCGATTGCTGCGTTAGTTAAGTTACTGAGTGAAAATCCTTCAAGAGCACTAGCTGTTGCTGATGTTGAGATGAATGCCATTGATGTTCTTTGCAGAATTCTTTCATCAGACTGTTCAATGGACCTCAAAGGGGATGCTGCTGAACTATGTTGTGTTCTATTTGGAAATACAAGGATTCGATCCACAATGGCTGCTGCTCGGTGTGTTGAACCTCTGGTCTCTCTCCTTGTGAGTGAGTTTAGTCCAGCTCATCATTCAGTTGTCCGGGCATTGGATAGGCTTGTTGGTGATGAGCAATTGGCTGAGTTAGTTGCTGCACATGGTGCAGTTATTCCTCTCGTTGGCCTACTTTTTGGAAGGAACTTTGTACTTCATGAGGCCATTTCCAGAGCACTGGTCAAGTTAGGAAAAGATCGACCTGTTTGCAAAATGGAAATGGTGAAATCTGGAGTCATTGAAAGCATACTTGACATCCTTCATGAAGCACCTGATTATCTCTGTGCAGCATTTGCTGAATTGTTACGTATATTGACCAATAATGCTAGCATAGCCAAAGGACCATCAGCTGCTAAAGTGGTTGAACCCCTGTTCTTTTTGCTAACAAGACAAGAATTTGGGCCCGATGGACAACATAGTGCATTGCAGGTTTTGGTTAATATCTTAGAGCATCCGCAATGCCGTGCTGATTACACATTAACTTCTCACCAAGCTATTGAACCACTCATCCCCTTGCTTGATTCTCCAATAGAAGCAGTGCAACAGTTGGTTGCTGAGCTTCTCTCACATCTACTTTTAGAAGAACACCTTCAGAAGGATCCAGTGACACAGCAAGTAATTGGACCGCTTGTGCGAGTTCTTGGTTCTGGCATACAAATATTGCAGCAGAGAGCTTTGAAGGCCCTTGTCAGTATTGCAATTGTATGGCCAAATGAAATTGCAAAAGAGGGAGGTGTTGTTGAAATTTCCAAAGTTATATTGCAAGCTGACCCTTCCATTCCTCATGCTTTATGGGAGTCTGCTGCCTCTGTTTTGGCAAGTATTCTGCAATTTAGTTCTGAATTCTACTTGGAAATCCCTGTTGCTGTTTTGGTAAGGTTGCTTCAATCTGGATCAGAGAGCACAATTAGTGGTGCATTAAATGCTCTTCTTGTGTtggaaagtgatgatgaaactaGCGCAGCCGCGGAGGCAATGGCTGAAAGTGGTGCTATAGAGGCTCTCTTGGAGCTCCTTAGATCTCATCAGTGTGAGGACACTGCTGCAAGACTCTTAGAAGTATTGCTTAACAATGTAAAGATTAGAGAAACAAAAGTTACTAAATCAGCCATCTTACCATTATCTCAGTACCTCTTGGACCCACAAACTCAAGCACAACAAGCAAGGTTATTAGCAACTTTGGCTCTTGGTGATCTATTCCAGAATGAGGGGCTTGCTCGGACAGCTGATGCAGTCTCAGCTTGTCGTGCTTTAGTGAATGTGCTTGAAGACCAACCAACTGAAGAAATGAAAGTCATTGCCATATGTGCTCTGCAAAACCTTGTGATGTACAGTCGATCAAATAAAAGAGCAGTTGCAGAGGCCAGTGGGGTTCAGGTTATGCTGGATCTGATTGGTTCAGGTGATCCTGAAACATCTGTTCAGGCTGCAATGTTTATCAAACTTCTCTTTTCAAATCATACTATTCAAGAGTATGCTTCTAGTGAAACAGTCAGAGCAATAACCGCTGCTATTGAAAAGGATTTATGGGCTACTGGAACTGTGAACGACGAGTATCTTAAAACCTTAAATTCTCTATTTAGCGTCTACCCAAAGCTGAGAGCAACTGAACCGGCAACACTCAGCATTCCACATCTGGTTACATCCTTAAAGACAGGTTCAGAGGCTACTCAGGAAGCTGCCTTGGATGCACTTTTTCTTCTCAGGCAAGCTTGGTCAGCGTGCCCAGCAGAAGTTTCAAGAGCTCAGTCCATAGCAGCTGCGGATGCTATTCCTTTGTTACAGTTCTTAATCCAGTCTGGCCCACCTAGGTTTCAGGAGAAGGCAGAGTTTCTATTGCAGTGTTTGCCAGGGACATTGGTAGTGATTATCAAGTGCGGTAATAATATGAAGCAGTCTGTTGGAAACCCGAGTGTTTACTGTAAGCTTACACTTGGAAACACTCCTCCAAGGCAAACCAagGTGGTCTCTACTGGTCCCAACCCAGAGTGGGATGAGAGTTTCTCATGGTCCTTTGAGAGTCCTCCAAAAGGCCAGAAGCTTCATATTTCTTGCAAAAACAAGAGTAAAATGGGGAAGAGTTCATTCGGGAAAGTGACAATCCAGATTGATCGGGTGGTGATGCTGGGGGCAGTATCCGGTGAGTACACTCTGTTGCCGGAAAGTAAAAGTGGCCCCTCaagaaatttagaaatagaaTTTCAATGGTCTAACAAGTGA 6468 0.4269 MATAMTWRFSGNNGTTLASNDLERNGNGKAQDSDAPTPHSVPKMGLRERNSSGMEDADGTLASIAQCIEKLRQSSSSMQEKEYSLKQLSELIDTRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSEEGQVSAAKTIFAVSQGDAKDHVGSKIFSTEGVVPVLWEQLQKGLKSGSVVDSLLTGALKNLYSSTERFWNSTIQAGGVDILLKLLTTGQSSTLANVCFLLACMMMEDASFCSKVLTADATKQLLKLLGPGNDAPVRAEAAGALKSLSAQCQEARKEIANSNGIPALINATIAPSKEFMQGEYAQAIQENAMCALANISGGLSYVISSLGQSLESCSSPTQSADTLGALASALMIYDDKAESTRASDPLAVEQTLLEQFKPRSPFLVQERTIEALASLYGNPILSLKLANSDAKRLLVGLITMAANEVQDELLKALLTLCNSECSLWRALQGREGVQLLISLLGLSSEQQQECAIALLCLLSNENDESKWAITAAGGIPPLVQILESGSAKAKEDSATILRNLCDHSEDIRACVESADAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALRSMLSVVSLSDLLREGSASSDAINTMIKLLSSTKEETQAKSASALSGIFETRKDLRESNIAVKTLRSAMKLLNIESGSILVESSRCLAAIFLSIKENREVAANASDALSSLVALASSSDLEVAELATCAVANLFLDSEIAEDAVAEEVIFPATRVLREGTKSGKTHAAAAIARLLHSRQVDYAVNDCVNRAGTVLALVSFLGSVINEPVATAEALEALAILSRLKETTALSKPAWRILVEFPKSITPVVLSIADSTPVLQDKAIEILSRLCKDQPSVLGETVATASGCISSIAKRIINSTSTKMKVKIGGAAILICAAKENHQRLVEDLNISNLCANLVQSLVDMLISAQATLVNQDDFNKEVISICRHTKDANDGKSTNITTIISGADVALWLLSVLACHDEKSKIAIMEAGAIEILTDRIANFSSQYSQIDYKEDSSMWICAMLLAILFQDRDIIRAHATMISIPALANLLKSEESANKYFAAQSIASLVCNGSRGTLLSVANSGVAGGLISLLGCADVDIQDLLELSNEFSLPPYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGILTDLARDCPSNKIVMVESGAIEALTKYLSLGPQDAIEEAATDLLGILFSSAEIRKHESAFGAVTQLVAVLRLGGRAARYSAAKALESLFLADNIRNAETARHAVQPLVEILNTGLEREQHAAIAALVKLLSENPSRALAVADVEMNAIDVLCRILSSDCSMDLKGDAAELCCVLFGNTRIRSTMAAARCVEPLVSLLVSEFSPAHHSVVRALDRLVGDEQLAELVAAHGAVIPLVGLLFGRNFVLHEAISRALVKLGKDRPVCKMEMVKSGVIESILDILHEAPDYLCAAFAELLRILTNNASIAKGPSAAKVVEPLFFLLTRQEFGPDGQHSALQVLVNILEHPQCRADYTLTSHQAIEPLIPLLDSPIEAVQQLVAELLSHLLLEEHLQKDPVTQQVIGPLVRVLGSGIQILQQRALKALVSIAIVWPNEIAKEGGVVEISKVILQADPSIPHALWESAASVLASILQFSSEFYLEIPVAVLVRLLQSGSESTISGALNALLVLESDDETSAAAEAMAESGAIEALLELLRSHQCEDTAARLLEVLLNNVKIRETKVTKSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARTADAVSACRALVNVLEDQPTEEMKVIAICALQNLVMYSRSNKRAVAEASGVQVMLDLIGSGDPETSVQAAMFIKLLFSNHTIQEYASSETVRAITAAIEKDLWATGTVNDEYLKTLNSLFSVYPKLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQFLIQSGPPRFQEKAEFLLQCLPGTLVVIIKCGNNMKQSVGNPSVYCKLTLGNTPPRQTKVVSTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKMGKSSFGKVTIQIDRVVMLGAVSGEYTLLPESKSGPSRNLEIEFQWSNK 2155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02305 2155 Gene3D - 1821 2032 IPR011989 -
Tsu07g02305 2155 Gene3D - 1368 1678 IPR011989 -
Tsu07g02305 2155 Gene3D - 50 413 IPR011989 -
Tsu07g02305 2155 SUPERFAMILY ARM repeat 884 1161 IPR016024 -
Tsu07g02305 2155 Pfam Armadillo/beta-catenin-like repeat 526 566 IPR000225 GO:0005515
Tsu07g02305 2155 Pfam Armadillo/beta-catenin-like repeat 105 135 IPR000225 GO:0005515
Tsu07g02305 2155 SUPERFAMILY ARM repeat 615 968 IPR016024 -
Tsu07g02305 2155 CDD C2 2036 2126 - -
Tsu07g02305 2155 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1198 1242 IPR000225 GO:0005515
Tsu07g02305 2155 MobiDBLite consensus disorder prediction 1 56 - -
Tsu07g02305 2155 ProSiteProfiles C2 domain profile. 2015 2132 IPR000008 -
Tsu07g02305 2155 Gene3D - 646 821 IPR011989 -
Tsu07g02305 2155 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 19 2155 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Tsu07g02305 2155 Gene3D - 822 1169 IPR011989 -
Tsu07g02305 2155 Gene3D - 1679 1813 IPR011989 -
Tsu07g02305 2155 Gene3D C2 domain 2033 2155 IPR035892 -
Tsu07g02305 2155 Coils Coil 298 325 - -
Tsu07g02305 2155 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 537 579 IPR000225 GO:0005515
Tsu07g02305 2155 SUPERFAMILY ARM repeat 466 641 IPR016024 -
Tsu07g02305 2155 SMART arm_5 269 310 IPR000225 GO:0005515
Tsu07g02305 2155 SMART arm_5 312 361 IPR000225 GO:0005515
Tsu07g02305 2155 SMART arm_5 1441 1481 IPR000225 GO:0005515
Tsu07g02305 2155 SMART arm_5 1611 1650 IPR000225 GO:0005515
Tsu07g02305 2155 SMART arm_5 526 566 IPR000225 GO:0005515
Tsu07g02305 2155 SMART arm_5 94 136 IPR000225 GO:0005515
Tsu07g02305 2155 SMART arm_5 1735 1773 IPR000225 GO:0005515
Tsu07g02305 2155 SMART arm_5 1861 1901 IPR000225 GO:0005515
Tsu07g02305 2155 SMART arm_5 1568 1609 IPR000225 GO:0005515
Tsu07g02305 2155 SMART arm_5 731 772 IPR000225 GO:0005515
Tsu07g02305 2155 SMART arm_5 568 608 IPR000225 GO:0005515
Tsu07g02305 2155 SMART arm_5 1231 1272 IPR000225 GO:0005515
Tsu07g02305 2155 SMART arm_5 1482 1523 IPR000225 GO:0005515
Tsu07g02305 2155 SMART arm_5 137 177 IPR000225 GO:0005515
Tsu07g02305 2155 SMART arm_5 818 860 IPR000225 GO:0005515
Tsu07g02305 2155 SMART arm_5 1400 1440 IPR000225 GO:0005515
Tsu07g02305 2155 SUPERFAMILY ARM repeat 1582 2031 IPR016024 -
Tsu07g02305 2155 SUPERFAMILY ARM repeat 67 377 IPR016024 -
Tsu07g02305 2155 SUPERFAMILY ARM repeat 1188 1570 IPR016024 -
Tsu07g02305 2155 Gene3D - 1180 1367 IPR011989 -
Tsu07g02305 2155 Gene3D - 414 645 IPR011989 -
Tsu07g02305 2155 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2034 2143 IPR035892 -
Tsu07g02305 2155 SMART C2_3c 2035 2131 IPR000008 -
Tsu07g02305 2155 Pfam C2 domain 2034 2130 IPR000008 -
Tsu07g02305 2155 MobiDBLite consensus disorder prediction 1 34 - -
Tsu07g02305 2155 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 19 2155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02305 Tsu-Chr7 26091342 26101216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02305 489 621 U-box Gene Family AT2G23140 40.000 6.75e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02305 - - gmx:100816765 3630.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02305 07 26091342 26101216 Tsu07g02305 07 26091342 26101216 ECH
Tsu02g00775 02 6490883 6501516 Tsu07g02305 07 26091342 26101216 PCT