Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02301 ATGACTTCTTCAACAGTTGAACCCTGCAAATCTGAGGATTTTCAGGTTGATATTGAGAAGAATCAGCAGGATGTAAGGTCTCAATGGGTGCTTAATGCACCTGAGCCTCCAAGTCCTTGGCATGTGACTATAGATTCTGTGAGAAAAACAGTTTCTAAGTATAGAGAGAAAGTTTCTTCTCTATGTGATCAACCATGTGGCACAATCTTTTCAGCTTTGCAGGTTGTTTTTCCTATTCTTGTTTGGGGAAGAAACTACACTGCTGCTAAATTTAGGAAAGATATTCTTGCTGGTCTCACTATTGCTAGTCTCTGTATTCCGCAgAGCATAGGATATGCAACATTAGCAAACCTTGCTCCTCAATATGGACTTTATACGAGTGTTGTACCGCCGCTTATCTATGCTGTAATGGGAACTTCAAGAGAGATAGCAATTGGTCCAGTAGCAGTGGTTTCCTTGCTGTTATCCTCAATGGTTCAAAAATTAATAGACCCTTCTACCGATCCAATTGGTTATACAAAGCTCATTTTTCTAGCTACTCTCTTTGCCGGTATCTTCCAAACAGCGTTTGGATTATTCAGGCTGGGGTTTCTTGTGGATTTTCTGTCACATGCTGCAATTGTTGGATTTGTAGCAGGAGCTGCAATTGTGATTGGGCTTCAACAGTTGAAGGGACTGTTTGGAATAACTcattttacaacaaaaacagATATAATCTctgtcatgaaagctgtttggGAAGCATTTCATAATCCCTGGAACCCTCATAATTTCTTCCTCGGAGCTTCATTCTTGGTGTTCATCCTAACAACTAGATTTGTGggtaaaaggaagaagaaattgttCTGGTTGGCATCAATTTCACCACTAGTATCGGTTATACTATCGACTCTGGTTGTTTTTCTAACACGAGCCGATAAAAATGGAGTTAAAATTGTGAAACATGTCAAAGGGGGACTCAATCCAATCTCCATCAATCAGCTAGACTTTAACAGTCCCCATGTTATAGATATCACGAAAATTGGACTTATTGTTGCTGTTGTTGCACTTACCgaATCTGTTGCTGTTGGACGATCTTTTGCATCCATAAAAGGATACCAACTTGATGGAAACAAAGAGATGATGTCAATAGGCTTCACAAACATCATTGGATCTCTCACATCTTGTTATGTTGCAACtgGTTCGTTCTCTCGCACGGCTGTTAATTACGCGGCGGGATGTGAAAGTTTAATATCAAACATTGTGATGGCCATTACAGTGATGATATCACTGCAGTTTTTGACAAATCTGTTGTATTATACACCAATTGCTATAATTGCATCAGTGATCATCTCAGCTCTACCAGGACTCATAGACATAACTGAAGCTTACAAAATTTGGAAGGTTGATAAGCTAGACTTTCTTGCTTGCATTGGTGCCTTCTTTGGTGTACTATTTGCTTCTGTGGAGATTGGTCTTCTAGTAGCGGTAGCGATATCATTTACGAAGATAATTGTGATCTCAATTCGACCAAACACAGAAACTTTAGGAAAACTTCCAGGAACTGATATGTTCTGTGATGTTGATCAGTATCCTATGGCAATTCAGGTTCCAGGGGTTATGATAATACGTATGAAATCTGCATTACTTTGCTTTGCAAATGCCAATTTTGTTAAAGAAAGGATCATCAAATGGGTCACTCAGGAAGATTCAGAAGATGACAAGGGAAATTCAAAAAGCTCCATTCAACTTGTTATTCTTGACACCTCAAATTTGGTGAACATTGACACCTCTGGAATTGCTTCTTTGGAGGAACTATACAAATGTTTGTCTTCACATGGGAAGCAGTTGGCCATTGCAAATCCGAGATGGCAAGTGATTCACAAGCTAAAGGTGTCAAACTTTGTCAACAAAATAAGTGGCAGAGTCTATCTAACTGTTGAAGAAGCTATTGTTGCAAACAACAAGAGTAATCAGTTCTAG 1962 0.3797 MTSSTVEPCKSEDFQVDIEKNQQDVRSQWVLNAPEPPSPWHVTIDSVRKTVSKYREKVSSLCDQPCGTIFSALQVVFPILVWGRNYTAAKFRKDILAGLTIASLCIPQSIGYATLANLAPQYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMVQKLIDPSTDPIGYTKLIFLATLFAGIFQTAFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLFGITHFTTKTDIISVMKAVWEAFHNPWNPHNFFLGASFLVFILTTRFVGKRKKKLFWLASISPLVSVILSTLVVFLTRADKNGVKIVKHVKGGLNPISINQLDFNSPHVIDITKIGLIVAVVALTESVAVGRSFASIKGYQLDGNKEMMSIGFTNIIGSLTSCYVATGSFSRTAVNYAAGCESLISNIVMAITVMISLQFLTNLLYYTPIAIIASVIISALPGLIDITEAYKIWKVDKLDFLACIGAFFGVLFASVEIGLLVAVAISFTKIIVISIRPNTETLGKLPGTDMFCDVDQYPMAIQVPGVMIIRMKSALLCFANANFVKERIIKWVTQEDSEDDKGNSKSSIQLVILDTSNLVNIDTSGIASLEELYKCLSSHGKQLAIANPRWQVIHKLKVSNFVNKISGRVYLTVEEAIVANNKSNQF 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02301 653 Pfam Sulfate permease family 91 471 IPR011547 GO:0016021
Tsu07g02301 653 PANTHER SULFATE TRANSPORTER 25 647 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tsu07g02301 653 PANTHER SULFATE TRANSPORTER 2.2 25 647 IPR030315 GO:0008272|GO:0015116
Tsu07g02301 653 Gene3D STAS domain 503 650 IPR036513 -
Tsu07g02301 653 ProSiteProfiles STAS domain profile. 543 647 IPR002645 -
Tsu07g02301 653 CDD STAS_SulP_like_sulfate_transporter 524 632 - -
Tsu07g02301 653 SUPERFAMILY SpoIIaa-like 528 644 IPR036513 -
Tsu07g02301 653 Pfam STAS domain 524 643 IPR002645 -
Tsu07g02301 653 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Tsu07g02301 653 TIGRFAM sulP: sulfate permease 78 633 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02301 Tsu-Chr7 26066856 26074510 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02301 20 646 Inorganic Solute Cotransporters AT5G10180 67.091 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02301 K17469 - gmx:100817831 1076.62