Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02300 ATGAATCTAACAACACCATCTCTTCCATCACTAGAAGTGTTAATGGACCTTGAGAATGAGAACAATGGTAGAGAAAATAGATCACTATGGGTGCTCAATCCTCCTGAGCCACCATGCATGTTGCGTCGTGTCGTGGAAAATATCAAGGACAACATCTTACATTATCCGATTCGAAACCGATTCTTTTCTCTCAAACATCAATCTTCTCCAAAATTAGTATTACCTTTGTTGTTTCCTATCcttaattcattcaaaaactACAATGTTCACAAGTTCAAGTGCGATGTCTTAGCGGGTCTAATCCTCGCAATCTTTGCTATTCCACAGGCTATGGGAAATGCGAGTTTGGCGAAAATGAGTCCGGAATACGGCCTATATACAAGTATTGTGCCACCTCTTATTTATGCTTTGATGGCAAGTTCAAGGGAGATAGTAATAGGACCTGTAACTGTGGATTCATTGCTACTTTCATCAATGATTCAAACATTGAAAGATCCTATAAATGACCCTATAGCTTATACTCAGCTTGTTTTGACTGCAACTTTTTTTACTGGTGTCTTCCAAGTTGCTTTTGGATTCCTTAGgTTTGGGTTTCTGGTAGATTATCTTTCCCATGCCACAATGGTAGGGTTCTTGGCAGCAGTTGCCATAGGCATTGTACTACAACAATTGAAAGGATTATTTGGAATCACACACTTCACCAACAAAACTGATTTAATTTCTGTGATTAAATCTCTTTTGACATCCTACAAAAATCAAACAGAATGGCATCCTTACAATTTTATTATTGGATTCTCATTTTTGTCTTTCATCATACTTACAAGATTCCTTgggaaaaagaaaaagaaattaatgtgGCTATCACACATTGCTCCTCTTGTTTCATTCATTATATCAACTGTTATTGCATATAAAGTAAATGTTCATCAAATTAAACTTGAGGACTATAAAATTGAAGTCTTAGGACCAATCAAAGGAGGTAGCTTAAATCCAAGTTCACTCAACCAATTACAACTAGACGGTAATGGTAAATATTTGGGTCCTTTAATCAAAATAGCGTTAACCGTTGCTATTATTTCAACCACGGAATCTGTAGCTGTTGGTAGAATATTTGCATCACTTAGAGGTTACAATATTGATCCAAACAGAGAAGTTTTATCATTAGGCATAATGAACATTTTTGGATCCTTCACTTCTTGCTATGTTGCATCAGGTTCAATTTCACGGACGGCTGTAAATTATAATGCCGGCTCTCAAACAACGGTATCGAGCATAGTGATGGCACTCACAGTGTTGATGTCGcttaaatttttaacaaaactcTTATATTTCACTCCCAAAGCAATGCTAGCAGCAATAATTCTTTCAGCTGTACCAGGACTTGTTGATTTTAAAAAAGCATATGAAATTTGGAAGATCGATAAATTAGATTTTCTTGCTTGTGCTGGAGCTTTCTTTGGAGTTTTGTTTTCATCTGTCGAAATGGGCCTTGCAATTgggGCAGCGATATCATTTGCGAAGATAATTGTGATTTCGATTCAACCTAGCATAGCGGTTATTGGAAGGCTTCCAGGAACGGACGCATTTGGTGACGTAGAACAATATCCAATGGCGGTTAGCATGCCTGGTGTTTTGGTTGTCTCTATTAAATTTGCTTGGCTTTGTTTCGCAAATGCAAGTCCTATTAGGGAAAAGATCGAGAAATGGGTGATCAATGAAGGTGAAAATAGTAGAGGAGAAAGCACTATCAAAGTCGTCATTATCGATACATCAAGTCTTGTGAGTATTGACACAGCAGGAATAACTTCTTTGGTGGAGCTGAATAAGAATCTTACTTTACATGGAGTAACAttATCCATTGCTAATCCAAGGTGGCAAGTAATTCACAAGTTAAGATTGGCTAACTTTGTGAATGAAATTGGAGGAAGGGTTTTCTTGTCTGTGGGAGAAGCTATAGATGCAATACTTAGTGCTAAAATAGCTGCCGTATATTTAACAAATAGTATTTGTTag 2013 0.3602 MNLTTPSLPSLEVLMDLENENNGRENRSLWVLNPPEPPCMLRRVVENIKDNILHYPIRNRFFSLKHQSSPKLVLPLLFPILNSFKNYNVHKFKCDVLAGLILAIFAIPQAMGNASLAKMSPEYGLYTSIVPPLIYALMASSREIVIGPVTVDSLLLSSMIQTLKDPINDPIAYTQLVLTATFFTGVFQVAFGFLRFGFLVDYLSHATMVGFLAAVAIGIVLQQLKGLFGITHFTNKTDLISVIKSLLTSYKNQTEWHPYNFIIGFSFLSFIILTRFLGKKKKKLMWLSHIAPLVSFIISTVIAYKVNVHQIKLEDYKIEVLGPIKGGSLNPSSLNQLQLDGNGKYLGPLIKIALTVAIISTTESVAVGRIFASLRGYNIDPNREVLSLGIMNIFGSFTSCYVASGSISRTAVNYNAGSQTTVSSIVMALTVLMSLKFLTKLLYFTPKAMLAAIILSAVPGLVDFKKAYEIWKIDKLDFLACAGAFFGVLFSSVEMGLAIGAAISFAKIIVISIQPSIAVIGRLPGTDAFGDVEQYPMAVSMPGVLVVSIKFAWLCFANASPIREKIEKWVINEGENSRGESTIKVVIIDTSSLVSIDTAGITSLVELNKNLTLHGVTLSIANPRWQVIHKLRLANFVNEIGGRVFLSVGEAIDAILSAKIAAVYLTNSIC 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02300 670 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Tsu07g02300 670 Pfam Sulfate permease family 92 482 IPR011547 GO:0016021
Tsu07g02300 670 Gene3D STAS domain 514 658 IPR036513 -
Tsu07g02300 670 TIGRFAM sulP: sulfate permease 79 647 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tsu07g02300 670 Pfam STAS domain 535 651 IPR002645 -
Tsu07g02300 670 PANTHER SULFATE TRANSPORTER 17 662 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tsu07g02300 670 SUPERFAMILY SpoIIaa-like 541 655 IPR036513 -
Tsu07g02300 670 CDD STAS_SulP_like_sulfate_transporter 535 646 - -
Tsu07g02300 670 ProSiteProfiles STAS domain profile. 554 655 IPR002645 -
Tsu07g02300 670 PANTHER EARLY NODULIN-70 17 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02300 Tsu-Chr7 26036551 26040347 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02300 24 660 Inorganic Solute Cotransporters AT5G10180 52.950 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02300 K17469 - gmx:100817841 884.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02300 07 26036551 26040347 Tsu07g02300 07 26036551 26040347 ECH