Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02248 ATGGCGTCTCTGTTACCTTGCACACCGACTATACTGTCTACTCCGTTCGCAAACCGAACCACTACCCATCTTCCGCTTCGACCTCACTCACACGCTTTCCCACCCTCCACCAAACGGTTCCTTCGCGGTTCACTTTCCGTTGCCCGTTTCGGATTTCAACCCGGGTTTTTACCCGAACCGGAAGACGCTGAATTCGTCATCAGGGAATTGTATAATCGAGCGGAGGGTTTAATTTACACAATTGCCGATGCTGCTGTCTCGTCTTCCGATACGGTGGTTACTACCACCACCGCCACCGCCAAGCAGAACAATGATTGGTTTTCTGGAATTACCAATTCTATGGAGACTGTTCTCAAGATACTCAAGGATGGGCTTTCTACTTTGCATGTGCCGTATGCTTATGGTTTTGCAATTATAATGCTTACAGTTCTTGTAAAAGCTGCCACATTTCCATTGACAAGAAAACAGGTAGAATCTGCCATGGCAATGCGATCTTTGCAACCTCAAATAAAGGCTATCCAAAAACAGTATGCCGGGGATCAGGAGAGAATTCAACTTGAAACTGCTCGGTTATATAAATTAGCCAACATTAATCCTCTAGCAGGATGCTTGCCTGTTCTCTTAACGACACCTGTGTGGATCGGGCTATATCGAGCCTTTTCTAATGTGGCAGATGAGGGACTCCTTAGTGAAGGCTTCTTTTGGATACCTTCTCTTTCTGGTCCAACTACAATTGCAGCTCGGCAAAGTGGAAGTGCTATCTCATGGCTTTTTCCTTTTGTGgATGGTCACCCTCCCCTTGGATGGCCAGATACGTTGGCTTACCTTGTCTTGCCTGTTTTGCTGGTTGTCTCGCAATACATTTCTCTTCAAATAATACAATCATCACAGGCTACTGATCCCAACGTGAAGAGTTCTCAAGTCTTAAACAAGGTCTTTCCATTAGTGATCGGTTATTTATCTCTTTCAGTTCCTTCTGGTCTTAGCCTTTACTGgttcacaaataatatattgagCACTTTACAGCAAATATGGCTTCAAAAGTTAGGGGGTGCAAAAAATCCTTTTGGACAAGTTCTAgatgataatttgaaaagtGACCCAATGCAGATTCAGAAAAATGACCCAATGCAGATTCAGAAGTCAGTATCTAAACTAAATTCCACAAAAGTTGAAGACGCTAGAAAAGGTGAAAAATTGACACCGGAAGGGCCACAACCTGGTGACAGATTTAAGCAATTAATGGAGCTAGAGGCAAGGAAGAAACAgcagagagaagaagaaaaaaggaagGCTGAGGAAGCAGCAGCTAAAGCTAATCATGAGCAAACAATTGAAGGGAGAAATCAAGCTGTAGGCAACATAGTTGAAAATTCCCAATCTGTGGGTGCTGATACTGATCCATCCATATCTGGAGTAGTAAACGGTAATCCGTTAAGTAAGGACTTGGAGGGAAATCAGAATTCTACATCTAAATCTGGTTCTGAAAATGATGAGGGTTCTGATAATTTCAATGCAGTAAACGAGAAAAGTCTAGAAAAGGAACCAAGAGAAGTATTAACAACCACAACTACGAACAAGCAACCTCATGGAGAAGACCCAGATCACGTGACAAAGGATTGA 1623 0.4171 MASLLPCTPTILSTPFANRTTTHLPLRPHSHAFPPSTKRFLRGSLSVARFGFQPGFLPEPEDAEFVIRELYNRAEGLIYTIADAAVSSSDTVVTTTTATAKQNNDWFSGITNSMETVLKILKDGLSTLHVPYAYGFAIIMLTVLVKAATFPLTRKQVESAMAMRSLQPQIKAIQKQYAGDQERIQLETARLYKLANINPLAGCLPVLLTTPVWIGLYRAFSNVADEGLLSEGFFWIPSLSGPTTIAARQSGSAISWLFPFVDGHPPLGWPDTLAYLVLPVLLVVSQYISLQIIQSSQATDPNVKSSQVLNKVFPLVIGYLSLSVPSGLSLYWFTNNILSTLQQIWLQKLGGAKNPFGQVLDDNLKSDPMQIQKNDPMQIQKSVSKLNSTKVEDARKGEKLTPEGPQPGDRFKQLMELEARKKQQREEEKRKAEEAAAKANHEQTIEGRNQAVGNIVENSQSVGADTDPSISGVVNGNPLSKDLEGNQNSTSKSGSENDEGSDNFNAVNEKSLEKEPREVLTTTTTNKQPHGEDPDHVTKD 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02248 540 PANTHER OXA1 15 472 IPR001708 GO:0016021|GO:0032977
Tsu07g02248 540 Coils Coil 411 442 - -
Tsu07g02248 540 Pfam 60Kd inner membrane protein 134 348 IPR001708 GO:0016021|GO:0032977
Tsu07g02248 540 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 134 348 IPR028055 -
Tsu07g02248 540 MobiDBLite consensus disorder prediction 388 405 - -
Tsu07g02248 540 MobiDBLite consensus disorder prediction 443 507 - -
Tsu07g02248 540 PANTHER BNAA09G28180D PROTEIN 15 472 - -
Tsu07g02248 540 MobiDBLite consensus disorder prediction 361 540 - -
Tsu07g02248 540 MobiDBLite consensus disorder prediction 413 441 - -
Tsu07g02248 540 MobiDBLite consensus disorder prediction 365 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02248 Tsu-Chr7 25367196 25374431 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02248 62 429 Chloroplast and Mitochondria Gene Families AT2G28800 51.087 3.79e-126 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02248 K03217 - gmx:100802546 714.531