Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu07g02243 | ATGGTGCTCAATCCAATTTTGTACGAGGAATTTGTTAATTTGGGGCATGGATTTGATTTGAGGGTACTCTTGAGTAGAAAAGGCTTTGCTGGGTATAATTTGCAATGTACATTACTACACTTTGATCTTGAGGACAAGATCATTTTTAGAGCGGGTGGTAATGACATTATTTATGCTGTTTcgcttaaattttttatgactATGATGCTCTACAACGAGGGAACCATTGGTAACAACAAGGTTGTTGAAGTTAAAAAGTTGGAAAAGAACAGACATAAGAGGATTAGCAGGTTGTGGTGTTGCTATAAGAGTGATAACAACATGTTCTTGGTCTATGAATATATTTCAAATGAGAGCTTGATGGGTACATTGAATGGTAAGAAAAGCCTCTTATATTGTAATTACTGTTATAGCCCATTCATTGTATTCAttgttattgatgttgatgaGGGACTTGTTTATTTACATCATAATTGTGTCTTATCTATTGTTCATAAGCACATGAAGTCTAACAAAGTGCTTAGTGGAGTGTTTGAGAAAAAAGTAGCAGGAATAAGAATTGCCAAAATTGCTACCTTTATAAGCAAAGGGGTGGAATCCATTTATGTGACTATGAGATCTTTTGGCTATGTTGCAATGGTGAGAaggagaaaaaggaaaaagtggGATCCCAGTGGACATTGGGATATGTATGCATTGATTAGGTCCTCGCAGTTCAAGCAATGGGATCTGGGCAAAATTTGTGATAGGAGAAATTTCcacaaccttgaggacaagGATTCCAAAGTCCCAGACAACTTCAAGTCACCACACTTACCAACCTTTGATGGAAAGGCTGACCCTGTGGAGCATCTAATGGTTGTTGgaactcaaactgccatcatCGGAGCACCAGAACACCTTAGGTGCAAGCTCCTTTCAGGGACGCTCAAAGATGCTGCTTTGCGTTGGTACATGAACTTGCCTAAGAATTCCATCGAAAGTTACGCTGACTTTCACAATAAGTTCATATACCAATTCTCTGGAACCAAGCACATCAAAGTACCAGCGACTAGCTTATTCAGAATTCGTCAGAACTACGCTGAAACTCTTCGAGAATACCTCGCTAGATTCAGCGAAGCAACGATCAAGGTTTCCAATCCAAACCAGGAGATGTTCGTTGCTGCTTTTCACAACGGTTTGAAGGTTGTACACTTTAACGAGTCGCTAGCCCAAAAACTCGCTACTTCAATGCAAGAAGTTATCAAAAGAGCTAGTTGTTACATCAAAGGCGAGGAGAGAAATACAGAAAAATGCTCAAGAGACGCCAAAGAAAAAGATATGAGAAGTAACAACGGCAAGGGGCGGAGCTCACAACCCCAACGCAACTGGTAA | 1374 | 0.3734 | MVLNPILYEEFVNLGHGFDLRVLLSRKGFAGYNLQCTLLHFDLEDKIIFRAGGNDIIYAVSLKFFMTMMLYNEGTIGNNKVVEVKKLEKNRHKRISRLWCCYKSDNNMFLVYEYISNESLMGTLNGKKSLLYCNYCYSPFIVFIVIDVDEGLVYLHHNCVLSIVHKHMKSNKVLSGVFEKKVAGIRIAKIATFISKGVESIYVTMRSFGYVAMVRRRKRKKWDPSGHWDMYALIRSSQFKQWDLGKICDRRNFHNLEDKDSKVPDNFKSPHLPTFDGKADPVEHLMVVGTQTAIIGAPEHLRCKLLSGTLKDAALRWYMNLPKNSIESYADFHNKFIYQFSGTKHIKVPATSLFRIRQNYAETLREYLARFSEATIKVSNPNQEMFVAAFHNGLKVVHFNESLAQKLATSMQEVIKRASCYIKGEERNTEKCSRDAKEKDMRSNNGKGRSSQPQRNW | 457 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu07g02243 | 457 | SUPERFAMILY | Protein kinase-like (PK-like) | 79 | 174 | IPR011009 | - | |
Tsu07g02243 | 457 | MobiDBLite | consensus disorder prediction | 429 | 445 | - | - | |
Tsu07g02243 | 457 | Pfam | Retrotransposon gag protein | 306 | 395 | IPR005162 | - | |
Tsu07g02243 | 457 | PANTHER | RECEPTOR KINASE-LIKE PROTEIN XA21 | 82 | 212 | - | - | |
Tsu07g02243 | 457 | MobiDBLite | consensus disorder prediction | 429 | 457 | - | - | |
Tsu07g02243 | 457 | ProSiteProfiles | Protein kinase domain profile. | 8 | 337 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu07g02243 | 457 | Gene3D | Transferase(Phosphotransferase) domain 1 | 65 | 233 | - | - | |
Tsu07g02243 | 457 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE 5 | 82 | 212 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu07g02243 | Tsu-Chr7 | 25350025 | 25352436 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu07g02243 | 81 | 212 | Receptor kinase-like Gene Family | AT4G28490 | 41.481 | 1.07e-18 | 87.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Tsu07g02243 | Retrotrans_gag | 5.8e-12 | CL0523 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu07g02243 | - | K00924 | egu:109505143 | 115.546 |