Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02243 ATGGTGCTCAATCCAATTTTGTACGAGGAATTTGTTAATTTGGGGCATGGATTTGATTTGAGGGTACTCTTGAGTAGAAAAGGCTTTGCTGGGTATAATTTGCAATGTACATTACTACACTTTGATCTTGAGGACAAGATCATTTTTAGAGCGGGTGGTAATGACATTATTTATGCTGTTTcgcttaaattttttatgactATGATGCTCTACAACGAGGGAACCATTGGTAACAACAAGGTTGTTGAAGTTAAAAAGTTGGAAAAGAACAGACATAAGAGGATTAGCAGGTTGTGGTGTTGCTATAAGAGTGATAACAACATGTTCTTGGTCTATGAATATATTTCAAATGAGAGCTTGATGGGTACATTGAATGGTAAGAAAAGCCTCTTATATTGTAATTACTGTTATAGCCCATTCATTGTATTCAttgttattgatgttgatgaGGGACTTGTTTATTTACATCATAATTGTGTCTTATCTATTGTTCATAAGCACATGAAGTCTAACAAAGTGCTTAGTGGAGTGTTTGAGAAAAAAGTAGCAGGAATAAGAATTGCCAAAATTGCTACCTTTATAAGCAAAGGGGTGGAATCCATTTATGTGACTATGAGATCTTTTGGCTATGTTGCAATGGTGAGAaggagaaaaaggaaaaagtggGATCCCAGTGGACATTGGGATATGTATGCATTGATTAGGTCCTCGCAGTTCAAGCAATGGGATCTGGGCAAAATTTGTGATAGGAGAAATTTCcacaaccttgaggacaagGATTCCAAAGTCCCAGACAACTTCAAGTCACCACACTTACCAACCTTTGATGGAAAGGCTGACCCTGTGGAGCATCTAATGGTTGTTGgaactcaaactgccatcatCGGAGCACCAGAACACCTTAGGTGCAAGCTCCTTTCAGGGACGCTCAAAGATGCTGCTTTGCGTTGGTACATGAACTTGCCTAAGAATTCCATCGAAAGTTACGCTGACTTTCACAATAAGTTCATATACCAATTCTCTGGAACCAAGCACATCAAAGTACCAGCGACTAGCTTATTCAGAATTCGTCAGAACTACGCTGAAACTCTTCGAGAATACCTCGCTAGATTCAGCGAAGCAACGATCAAGGTTTCCAATCCAAACCAGGAGATGTTCGTTGCTGCTTTTCACAACGGTTTGAAGGTTGTACACTTTAACGAGTCGCTAGCCCAAAAACTCGCTACTTCAATGCAAGAAGTTATCAAAAGAGCTAGTTGTTACATCAAAGGCGAGGAGAGAAATACAGAAAAATGCTCAAGAGACGCCAAAGAAAAAGATATGAGAAGTAACAACGGCAAGGGGCGGAGCTCACAACCCCAACGCAACTGGTAA 1374 0.3734 MVLNPILYEEFVNLGHGFDLRVLLSRKGFAGYNLQCTLLHFDLEDKIIFRAGGNDIIYAVSLKFFMTMMLYNEGTIGNNKVVEVKKLEKNRHKRISRLWCCYKSDNNMFLVYEYISNESLMGTLNGKKSLLYCNYCYSPFIVFIVIDVDEGLVYLHHNCVLSIVHKHMKSNKVLSGVFEKKVAGIRIAKIATFISKGVESIYVTMRSFGYVAMVRRRKRKKWDPSGHWDMYALIRSSQFKQWDLGKICDRRNFHNLEDKDSKVPDNFKSPHLPTFDGKADPVEHLMVVGTQTAIIGAPEHLRCKLLSGTLKDAALRWYMNLPKNSIESYADFHNKFIYQFSGTKHIKVPATSLFRIRQNYAETLREYLARFSEATIKVSNPNQEMFVAAFHNGLKVVHFNESLAQKLATSMQEVIKRASCYIKGEERNTEKCSRDAKEKDMRSNNGKGRSSQPQRNW 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02243 457 SUPERFAMILY Protein kinase-like (PK-like) 79 174 IPR011009 -
Tsu07g02243 457 MobiDBLite consensus disorder prediction 429 445 - -
Tsu07g02243 457 Pfam Retrotransposon gag protein 306 395 IPR005162 -
Tsu07g02243 457 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 82 212 - -
Tsu07g02243 457 MobiDBLite consensus disorder prediction 429 457 - -
Tsu07g02243 457 ProSiteProfiles Protein kinase domain profile. 8 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02243 457 Gene3D Transferase(Phosphotransferase) domain 1 65 233 - -
Tsu07g02243 457 PANTHER RECEPTOR-LIKE PROTEIN KINASE 5 82 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02243 Tsu-Chr7 25350025 25352436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02243 81 212 Receptor kinase-like Gene Family AT4G28490 41.481 1.07e-18 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu07g02243 Retrotrans_gag 5.8e-12 CL0523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02243 - K00924 egu:109505143 115.546