Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02241 ATGGCGGTTCTGTTACCTTCCACACCAACTATACTCTCTACTCCGTTCGCAAACCGGACCACAACCCATTTTCCGGTTCGACCTCACTCCAACCCCTTCTCACTCTCCACCAAACGCTTTCTTCGCGGTTCTCTTTCCGTTACCCGTTTCGGATTTCAACCCGGCTTTTTACCCGAACCGGAAGACACCGAATTCGTTATTAGGGAATTGTATAGCCGAACGGAGGGTTTTCTTTACACAATTGCCGATGCCGCTGTTTCTTCTTCCGATACGGTGGTAAACACCGCCATCGCCACCGCCAAGGAGAACAACGATTGGTTTTCATTAATTACCAATTACGTCGAGACTGTTCTCAAGGTACTTAAGTATGGGCTTTCTACTTTGCATGTGCCGTATGCTTATGGTTTTGCAATTATAATGCTTGCAGTTCTTGTAAACGCTGCTATATTTCCGTTTGCGAGAAAACAGGTAGAATCTCTCATGGCAATGCAATCTTTGGAATCTCAATTAGAGGCTATCCTAAAACAATATGCCGGGGATCAGGATCAAATCGCACTTGAAACTGCTCGgttatttaaattaaacaacATTGATCCTCTACCAGGATGCCTTCCCAATCTCTTAACAATATCAGTGTGGATTGGGCTATATCAAGCATTTTCTAAGATGGCAGATGGGGGACCTCTTAGTGAAGGCTTCTTTTGGATACCTTCTCTTTCTGGTCCAACTACAATTGCAGCTCTGGAAAATGGAAGTGGTATCTCTTGGCTTTTTCCTTTTGTGGATGGTCACCCTCTTCTTGGATGGCCAGATACACTGGCTTACCTTGTCTTGCCTGTTTTGCTGGCTGTCTCTCAATACATTTCTCTCcaaataataccatcatcagAGGGACCATCAGTTTTTACCAAAGCTCTAGAGCAAGGAGATTGGTCCTTTGGGATATCCTTGACCTATGAGAAAAAgGATACTGATCCCAACGTGAAGAGTTCTCAAGAAGCCTTTCCTGTCAATTTTCAGGATATTGATCCCAACGCGGAGAGTTCGAAAGTCTTGGACAATGTCCTCGAATCATTAGTGATTGgttgtttttctcttttagtTCCTTCTGGTCTTATCCTTTACTGGTTCACAGATAATATATTGACCACTTTACAGCAAATATGGCTTAAAAAGTTAGGAGGTGCAAAAAACCCTCTGAGACAAGTTGTAGATGATAATGTGAAAAACGACCCAATGCAGATTTAG 1248 0.4183 MAVLLPSTPTILSTPFANRTTTHFPVRPHSNPFSLSTKRFLRGSLSVTRFGFQPGFLPEPEDTEFVIRELYSRTEGFLYTIADAAVSSSDTVVNTAIATAKENNDWFSLITNYVETVLKVLKYGLSTLHVPYAYGFAIIMLAVLVNAAIFPFARKQVESLMAMQSLESQLEAILKQYAGDQDQIALETARLFKLNNIDPLPGCLPNLLTISVWIGLYQAFSKMADGGPLSEGFFWIPSLSGPTTIAALENGSGISWLFPFVDGHPLLGWPDTLAYLVLPVLLAVSQYISLQIIPSSEGPSVFTKALEQGDWSFGISLTYEKKDTDPNVKSSQEAFPVNFQDIDPNAESSKVLDNVLESLVIGCFSLLVPSGLILYWFTDNILTTLQQIWLKKLGGAKNPLRQVVDDNVKNDPMQI 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02241 415 Pfam 60Kd inner membrane protein 134 392 IPR001708 GO:0016021|GO:0032977
Tsu07g02241 415 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 134 391 IPR028055 -
Tsu07g02241 415 Coils Coil 163 183 - -
Tsu07g02241 415 PANTHER BNAA09G28180D PROTEIN 340 406 - -
Tsu07g02241 415 PANTHER BNAA09G28180D PROTEIN 47 298 - -
Tsu07g02241 415 PANTHER OXA1 340 406 IPR001708 GO:0016021|GO:0032977
Tsu07g02241 415 PANTHER OXA1 47 298 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02241 Tsu-Chr7 25341578 25347636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02241 62 397 Chloroplast and Mitochondria Gene Families AT2G28800 43.750 1.05e-87 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02241 K03217 - gmx:100802546 478.789