LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu07g02206	ATGTTGTCTTGCATAAGCATATCACCATTATCAGCCATTAAAAAAGAAACTCGCATAGGAGCTTCCTTACTTCAATTGCATTTCCATGACCGCTTTGTAAACGGCTGTGATGCATCAATACTGGCTGAAATAAAAGTGGACAAGGCTGGATGTCACCTAGTTTCGCCTAGGAATGCTCTTGCTGCAAAATCAGTTGCTTCTAAGGATGTTGCTATGAGCCACTTTGTATTCCGACTTGACTATAATGATTGGAAGGTGCACAGCAAGTGTCCCAGAAGTGGAAATGACAATGTACACGAACCCCTCGACTATCAAACTCCGACCCATTTTGATAACCTATACTTGAAGAACTTACTAGCAAAAAAAGCTCTTCTCCATTCAGACCAAGAGCTGTTCAGTGGAAGTTCTACTACCGACAATCTTATGAAGAAATATGCTACTAATAATGATGCATTTTTTAAAGCCTTTGCCAAAACCCTAGAAATGCTAAATGAGAAAGGCACATTAGCTCTCACTCGTGGTGGAGAGGCCAATGAGACAGGCTTACATCTTTTGGCTCGAAAATATTCGGCATGTGATTGTCAACGTCTTGGACATCGCAAAAACCTCTTACACTTATGTATGAGGGATGCTCCAATTCTTAAGCTTATAAGAAAAATGTGGGATAATTATCTTGTCCTAGATGACTTAGAGATGAAGAAAATCATGGGAGAACCATATCAAGTTACATTTATTGCAGCTGAAGTTGGAAATTTTGAGTTTCTATCTGTGGTTATGAGAACTTATCGTGATTTGATATGGGAACTTAATAACATGGGTCAAAGCATAATCTACATTGCTATTTTGCATAGACATGCTAATATCTTCAATTTGATACATGAAATTGGCCCTTTCAAAGATATCATAACTACTTTTGAGGATGATAACAACAATAATTTCTTGCATTCTGTGGCAAAATTAGCACCACCATATCGACTCAATATAGTTTATGGAGCTGCTCTACAAATGATGCTCGAGTTGTCATGGTTTGAGGAGGTGAAAAAGGTAATGCCATCATCATTAATAGAAGCAAAAAATTCAGAAGGCTTTACACCTCATGAACTATTTACAGAAGAACATGACGAATTACGTAAAAAAGGAGAATCATGGATGAAACAAACAGCAAATTCTTGTATGGTTGTTTCAACTCTCATAGCAACTGGAGTATTTTCAGCTGCATTTAGCTTACCGGGTGGCAACAATGATAACACAGAATCTCCCAATTATTTGAACAAACCATCATTCCTCATATTTGCATTATCAGATTCCATGGCACTTATTTCATCTTTAACTTCAATCTTAATTTTTCTTTCCATCCTTATCTCGCGATACGCGGAACAAGATTTTCTCAAGTCATTGCCTTTGAAGTTGATCTCAGGATTAGTAGCATTGTTTGTCTCAATAATCAGCATGTTGGTAGCATTTAGTAGTGCATTTTTCATAACATATTATCATGGTTTGAAATGGGTTCCAAACTTCATTTCTGCCCTTGCATTTTTACCAATACCATTGTTTATATATCTACAATTTTCTTTATGGCCTGATATAGTTTACTCTGCTTATATTTGTAGATTTTTATTTAAGCCAACTAAACGTATGATTATTTAG	1647	0.3637	MLSCISISPLSAIKKETRIGASLLQLHFHDRFVNGCDASILAEIKVDKAGCHLVSPRNALAAKSVASKDVAMSHFVFRLDYNDWKVHSKCPRSGNDNVHEPLDYQTPTHFDNLYLKNLLAKKALLHSDQELFSGSSTTDNLMKKYATNNDAFFKAFAKTLEMLNEKGTLALTRGGEANETGLHLLARKYSACDCQRLGHRKNLLHLCMRDAPILKLIRKMWDNYLVLDDLEMKKIMGEPYQVTFIAAEVGNFEFLSVVMRTYRDLIWELNNMGQSIIYIAILHRHANIFNLIHEIGPFKDIITTFEDDNNNNFLHSVAKLAPPYRLNIVYGAALQMMLELSWFEEVKKVMPSSLIEAKNSEGFTPHELFTEEHDELRKKGESWMKQTANSCMVVSTLIATGVFSAAFSLPGGNNDNTESPNYLNKPSFLIFALSDSMALISSLTSILIFLSILISRYAEQDFLKSLPLKLISGLVALFVSIISMLVAFSSAFFITYYHGLKWVPNFISALAFLPIPLFIYLQFSLWPDIVYSAYICRFLFKPTKRMII	548

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu07g02206	548	ProSiteProfiles	Plant heme peroxidase family profile.	28	181	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Tsu07g02206	548	Pfam	Peroxidase	83	147	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Tsu07g02206	548	Pfam	Peroxidase	12	42	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Tsu07g02206	548	PRINTS	Plant peroxidase signature	117	134	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Tsu07g02206	548	PRINTS	Plant peroxidase signature	101	116	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Tsu07g02206	548	PRINTS	Plant peroxidase signature	1	11	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Tsu07g02206	548	Pfam	Domain of unknown function	382	494	IPR026961	-
	Tsu07g02206	548	PRINTS	Haem peroxidase superfamily signature	20	34	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Tsu07g02206	548	PRINTS	Haem peroxidase superfamily signature	103	118	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Tsu07g02206	548	PANTHER	ANKYRIN REPEAT PLANT-LIKE PROTEIN	156	547	-	-

Showing 1 to 10 of 14 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu07g02206	Tsu-Chr7	24656195	24661016	Tandem

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tsu07g02206	15	93	Peroxidase	AT3G50990	36.709	8.28e-06	46.2

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu07g02206	-		-	vun:114192271	511.916

Showing 1 to 1 of 1 entries