Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02206 ATGTTGTCTTGCATAAGCATATCACCATTATCAGCCATTAAAAAAGAAACTCGCATAGGAGCTTCCTTACTTCAATTGCATTTCCATGACCGCTTTGTAAACGGCTGTGATGCATCAATACTGGCTGAAATAAAAGTGGACAAGGCTGGATGTCACCTAGTTTCGCCTAGGAATGCTCTTGCTGCAAAATCAGTTGCTTCTAAGGATGTTGCTATGAGCCACTTTGTATTCCGACTTGACTATAATGATTGGAAGGTGCACAGCAAGTGTCCCAGAAGTGGAAATGACAATGTACACGAACCCCTCGACTATCAAACTCCGACCCATTTTGATAACCTATACTTGAAGAACTTACTAGCAAAAAAAGCTCTTCTCCATTCAGACCAAGAGCTGTTCAGTGGAAGTTCTACTACCGACAATCTTATGAAGAAATATGCTACTAATAATGATGCATTTTTTAAAGCCTTTGCCAAAACCCTAGAAATGCTAAATGAGAAAGGCACATTAGCTCTCACTCGTGGTGGAGAGGCCAATGAGACAGGCTTACATCTTTTGGCTCGAAAATATTCGGCATGTGATTGTCAACGTCTTGGACATCGCAAAAACCTCTTACACTTATGTATGAGGGATGCTCCAATTCTTAAGCTTATAAGAAAAATGTGGGATAATTATCTTGTCCTAGATGACTTAGAGATGAAGAAAATCATGGGAGAACCATATCAAGTTACATTTATTGCAGCTGAAGTTGGAAATTTTGAGTTTCTATCTGTGGTTATGAGAACTTATCGTGATTTGATATGGGAACTTAATAACATGGGTCAAAGCATAATCTACATTGCTATTTTGCATAGACATGCTAATATCTTCAATTTGATACATGAAATTGGCCCTTTCAAAGATATCATAACTACTTTTGAGGATGATAACAACAATAATTTCTTGCATTCTGTGGCAAAATTAGCACCACCATATCGACTCAATATAGTTTATGGAGCTGCTCTACAAATGATGCTCGAGTTGTCATGGTTTGAGGAGGTGAAAAAGGTAATGCCATCATCATTAATAGAAGCAAAAAATTCAGAAGGCTTTACACCTCATGAACTATTTACAGAAGAACATGACGAATTACGTAAAAAAGGAGAATCATGGATGAAACAAACAGCAAATTCTTGTATGGTTGTTTCAACTCTCATAGCAACTGGAGTATTTTCAGCTGCATTTAGCTTACCGGGTGGCAACAATGATAACACAGAATCTCCCAATTATTTGAACAAACCATCATTCCTCATATTTGCATTATCAGATTCCATGGCACTTATTTCATCTTTAACTTCAATCTTAATTTTTCTTTCCATCCTTATCTCGCGATACGCGGAACAAGATTTTCTCAAGTCATTGCCTTTGAAGTTGATCTCAGGATTAGTAGCATTGTTTGTCTCAATAATCAGCATGTTGGTAGCATTTAGTAGTGCATTTTTCATAACATATTATCATGGTTTGAAATGGGTTCCAAACTTCATTTCTGCCCTTGCATTTTTACCAATACCATTGTTTATATATCTACAATTTTCTTTATGGCCTGATATAGTTTACTCTGCTTATATTTGTAGATTTTTATTTAAGCCAACTAAACGTATGATTATTTAG 1647 0.3637 MLSCISISPLSAIKKETRIGASLLQLHFHDRFVNGCDASILAEIKVDKAGCHLVSPRNALAAKSVASKDVAMSHFVFRLDYNDWKVHSKCPRSGNDNVHEPLDYQTPTHFDNLYLKNLLAKKALLHSDQELFSGSSTTDNLMKKYATNNDAFFKAFAKTLEMLNEKGTLALTRGGEANETGLHLLARKYSACDCQRLGHRKNLLHLCMRDAPILKLIRKMWDNYLVLDDLEMKKIMGEPYQVTFIAAEVGNFEFLSVVMRTYRDLIWELNNMGQSIIYIAILHRHANIFNLIHEIGPFKDIITTFEDDNNNNFLHSVAKLAPPYRLNIVYGAALQMMLELSWFEEVKKVMPSSLIEAKNSEGFTPHELFTEEHDELRKKGESWMKQTANSCMVVSTLIATGVFSAAFSLPGGNNDNTESPNYLNKPSFLIFALSDSMALISSLTSILIFLSILISRYAEQDFLKSLPLKLISGLVALFVSIISMLVAFSSAFFITYYHGLKWVPNFISALAFLPIPLFIYLQFSLWPDIVYSAYICRFLFKPTKRMII 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02206 548 ProSiteProfiles Plant heme peroxidase family profile. 28 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g02206 548 Pfam Peroxidase 83 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g02206 548 Pfam Peroxidase 12 42 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g02206 548 PRINTS Plant peroxidase signature 117 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g02206 548 PRINTS Plant peroxidase signature 101 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g02206 548 PRINTS Plant peroxidase signature 1 11 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tsu07g02206 548 Pfam Domain of unknown function 382 494 IPR026961 -
Tsu07g02206 548 PRINTS Haem peroxidase superfamily signature 20 34 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g02206 548 PRINTS Haem peroxidase superfamily signature 103 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g02206 548 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 156 547 - -
Tsu07g02206 548 Gene3D Peroxidase, domain 2 81 163 - -
Tsu07g02206 548 PANTHER CASKIN 156 547 - -
Tsu07g02206 548 Gene3D - 2 80 - -
Tsu07g02206 548 SUPERFAMILY Heme-dependent peroxidases 11 167 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02206 Tsu-Chr7 24656195 24661016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02206 15 93 Peroxidase AT3G50990 36.709 8.28e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02206 - - vun:114192271 511.916