Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02174 ATGGAGATGAGCTGCCCATTAAATGTTAATAGCGACATTCCCGTGTGCTCTACTAGCACAGTTAATACTTCACACTCACACCAGAGTTTCTGTGGCTTTGTGCAACAGCCTTCTTTTGTGAGTGGATGGATGTATGTGAATGAACATGGACAAATGTGCGGTCCCTATATTAAGGAGCAGTTATATGAGGGCCTAACTACAGGTTTCTTGCCGTTTGAGCTTCCTGTGTATCCTGTGATCAATGGTACAATAATGAGCCCTGTACCATTGAATTATTTCAAACAGTTTCCTGACCATGTTTCCACCGGATTTGCGTATCTGAGTATGGATTTATCAGACACAAGGATGTCTACAAGTTGCTCCTCTTCTCAGGATATGACAATATATGGGCAAGAAAGATCTTTTGAGCTTGCTGCTCTTATGCCTGTTAACCCTGATTCAAAGTCTGTTTCACAGTCACATGTCAATGACTGCAATAAGGAATCCAATCACATGAATTTAAACTTTGAGGCATTCAGCAAGATAATTTCTTGTCAGATGTTGGGAGGGGAATGCTGTTGGCTTTATGAGGATAAAAAGGGTATGAAACATGGCCCACATTCCATTTCAGAATTGATTTCCTGGCACCACCATGGATATCTTGAAGATTCAACAGTGATCTCTCATTTTGACAATAAGTATGGAACCTTTGTGTTGCTGTCTGCTGTAAATGCATTGAAAGGAGATACATCTGGAACCATCTCTGGTTCAGATTCCAAAAGCAATGGAGTTGGTGATGTGATGAacttaatttatgaaatatCTGAAGACATTTCTTCCCAATTGCACATGGGTGTGATGAAAGCTTCCCGTAGAGTTATGCTAGATGGGATTATTGGCGACATCATTGCAGAATTTGTTACTGAAAAGAAATGCAAGAAGCAAAAGGTTGAGTCTGCTGATCGGACTTATGAAACTTGCATGTTGGACAATAAAATGATGAATAAAGGTACTTCCTTCCCAAGTGAGCCCGAACCTTCCCAACTGTCTTTAACGAGTGTTAAGTCAGTTGGAAGCATTGAAAATTTCTGGTGGTCATATGCTGCTGTTCGTAAAGCACTTTTTGACCGTTGCTTGCAAGACACGTGGAATGAAGTGTTTTTTGACACGGTAACAGAGTACTTTTTGTCCTGGAGAAAGAGGAAACTTTGGTCTCATCCTAAGCTTCAGTCATCTGTTAATGAATCTAAAGATTATGTTGAAAAGATTAAATCAAAAGCTTTGGTTCTCAGGCCAGGTTCCTCTGTATGCAATGTTGATGCTAATATCCAGTCTGAAGTGATGGCGACAGAAATAGATGGTCATCCTGAGTTATTTGTATCTCCTAATAACctcaaaagtgaaaataaagcaGAAGGTCAAAGAGTGTCATGCAGTTATCCTAACTCTAAAGATTTGACATGCATTCTTGAAAGTGTGCAGAACGAGCTTCACTTCTCTGCAAAGGCGTCTTTAGCTGATTATGTTCGAAGTGTTGTTGAAAAGGAAGTAAACCAATTAATTCCTTCCCTAGAGAAAGACAAATTTAGTGAGTTGCAGGTTGATGTTAGTGACTGCTGTATCTCAGAGATGCTTACCGTTAAAACTTTTGTTAAAGAAATTCTAAACGATAAATCCATCGATCCTGTGAAAAATGGAGATACAATTTGTGTGCCTTCATCTGGAAACCACATGTCTAGTGTATTCTCAAAAGCATTTCAAGAATTGTGTGGACATTCAAATGACGTGGCTGATGAAGAGGAGATTGGCGACCTACCACCTGGATTCGACAAGAACTCTCAAACAATATTCCCACACTGCAATTCAAAATTTCGACCTTCAAGATTAGTTGAATGTAATCCTAAGATTACAGAATATGTTGCAGCTGCATTGTGCAGACAGAAGCTGCATGATGAAGTTCTAGAAGAGTGGAAGTTTTCAATTCTCGATTCTacatttaaacaaatttttatgtcATCATCGaccataaagaaaaaatttcagTCTCGTGGTCATGAGAAGCGGAAGTCATTCAGTTCAAGCAAGGAGCATTTGAATGATGCTACTTCTGAACTGGGAAACGTGAAGGAAGGAACAAAAAGTTCCAGAGTTCCGCTGGCGACCGGAAAGCATACATATCACCGTAAGAAGCTGTCCCGGAAAGAGTTATGCTCCTTTCAGCCAGTTGTAGAAGATAATTCAGGGCCAGGGAAGCAACCTCTGGCTAAGTTAAGGAAACGTGTTTCTGGAGATGTGAAGGAGAGTGCAGAAGTTAAAATAACCGCTCTTAAAAGTGGAAAGGCTAAGATGATTAAAGGGAAGAAGGATACATCCTCTCAGAGCAGGTCTTCTGTCAATGTAGACAATAGCTCACCCAGTGATCAATTATCCTTGAAGAATAAAACTAGCCAGAAAGTTTTGAAGCTTTCGTGTACAGTTCAAAACGGTATTACAGATGTTGTGAAGTCTAATGAAAAGAAGCTATCCGTGTCAACAGATAATAGTGTTGGTATGAAAGTGGTTAAAAGAAATAACTCTGATGGCATCATTACGGATGTTGTGAAGTCTAATGGAAAGAAGCTATCAGTGTCAACAGATAATAGTGTTAGTATGAAGGTGGTTAAAAGAAATAAATCTGATGGCACCATTCACAAGAAGACCAACGGCCATATCTCCCTAGAGAAACCAAGTGCGACAAATAAAGtatcaaaatcaaaaagaaagcaTCAAACAGATGGTGTTACATCCTCGCATCCTTCTAAggttttgaaaatttcaaataGGGGTGCAAGTCTGGGAGCTAGCAAACAAGTAACTGAGGCACGGAGAAATTCTCCTCCCAAGTCATTGGATTTATGTCCTAGATCTAATGGATGTGCTAGGACTTCTATTAATGGGTGGGAATGGCGTAACTGGTCTCAAAATGCTAGTCCTGCAAGCAGAGCACGTGTGAGGGGTCTTCCACGTTTACAAAACAAGCGCGTAGATTCTGAAAATAATCCATCCCAGTTGTCAAATGGTAAAGGTCTTTCTGCAAGAACAAATAGGGTGAAATTGCGTAACCTTCTTGCTGCAGCTGAGGGTGCAGATCTTCTGAAAGTGCCTCAATTGAAGGCACGGAAAAAACGATTACGTTTTCAAAGGAGCAAGATACACGATTGGGGTCTTGTTGCCTTGGAACCAATAGAAGCAGACGACTTTGTGATTGAATATATTGGAGAATTAATTCGCTCTCGgATATCTGATATACGAGAGCTTCAATATGAGAAGATGGGAATTGGAAGCAGTTACCTTTTCAGACTCGATGATGGTTATGTGGTCGATGCTACAAAGAGAGGTGGGATTGCAAGATTTATTAACCATTCTTGTGAGCCCAACTGTTACACAAAGGTTATAGCTGTTGAGGGTCAAAAGAAGATTTTTATATATGCAAAACGGCATATAAAAGCTGGTGAAGAAATTACATACAATTACAAGTTTCCCTTGGAGGACAAAAAGATTCCCTGCAACTGTGGTTCCAAAAAGTGTCGCGGATCAATGAATTAG 3564 0.3909 MEMSCPLNVNSDIPVCSTSTVNTSHSHQSFCGFVQQPSFVSGWMYVNEHGQMCGPYIKEQLYEGLTTGFLPFELPVYPVINGTIMSPVPLNYFKQFPDHVSTGFAYLSMDLSDTRMSTSCSSSQDMTIYGQERSFELAALMPVNPDSKSVSQSHVNDCNKESNHMNLNFEAFSKIISCQMLGGECCWLYEDKKGMKHGPHSISELISWHHHGYLEDSTVISHFDNKYGTFVLLSAVNALKGDTSGTISGSDSKSNGVGDVMNLIYEISEDISSQLHMGVMKASRRVMLDGIIGDIIAEFVTEKKCKKQKVESADRTYETCMLDNKMMNKGTSFPSEPEPSQLSLTSVKSVGSIENFWWSYAAVRKALFDRCLQDTWNEVFFDTVTEYFLSWRKRKLWSHPKLQSSVNESKDYVEKIKSKALVLRPGSSVCNVDANIQSEVMATEIDGHPELFVSPNNLKSENKAEGQRVSCSYPNSKDLTCILESVQNELHFSAKASLADYVRSVVEKEVNQLIPSLEKDKFSELQVDVSDCCISEMLTVKTFVKEILNDKSIDPVKNGDTICVPSSGNHMSSVFSKAFQELCGHSNDVADEEEIGDLPPGFDKNSQTIFPHCNSKFRPSRLVECNPKITEYVAAALCRQKLHDEVLEEWKFSILDSTFKQIFMSSSTIKKKFQSRGHEKRKSFSSSKEHLNDATSELGNVKEGTKSSRVPLATGKHTYHRKKLSRKELCSFQPVVEDNSGPGKQPLAKLRKRVSGDVKESAEVKITALKSGKAKMIKGKKDTSSQSRSSVNVDNSSPSDQLSLKNKTSQKVLKLSCTVQNGITDVVKSNEKKLSVSTDNSVGMKVVKRNNSDGIITDVVKSNGKKLSVSTDNSVSMKVVKRNKSDGTIHKKTNGHISLEKPSATNKVSKSKRKHQTDGVTSSHPSKVLKISNRGASLGASKQVTEARRNSPPKSLDLCPRSNGCARTSINGWEWRNWSQNASPASRARVRGLPRLQNKRVDSENNPSQLSNGKGLSARTNRVKLRNLLAAAEGADLLKVPQLKARKKRLRFQRSKIHDWGLVALEPIEADDFVIEYIGELIRSRISDIRELQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVIAVEGQKKIFIYAKRHIKAGEEITYNYKFPLEDKKIPCNCGSKKCRGSMN 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02174 1187 ProSiteProfiles GYF domain profile. 184 234 IPR003169 GO:0005515
Tsu07g02174 1187 SUPERFAMILY SET domain 1044 1184 IPR046341 -
Tsu07g02174 1187 Pfam SET domain 1060 1164 IPR001214 GO:0005515
Tsu07g02174 1187 MobiDBLite consensus disorder prediction 775 805 - -
Tsu07g02174 1187 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 2 1187 IPR044570 GO:0042800|GO:0051568
Tsu07g02174 1187 ProSiteProfiles SET domain profile. 1048 1165 IPR001214 GO:0005515
Tsu07g02174 1187 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 2 1187 - -
Tsu07g02174 1187 SMART PostSET_3 1171 1187 IPR003616 -
Tsu07g02174 1187 MobiDBLite consensus disorder prediction 689 703 - -
Tsu07g02174 1187 SUPERFAMILY GYF domain 182 237 IPR035445 -
Tsu07g02174 1187 Gene3D SET domain 1040 1187 IPR046341 -
Tsu07g02174 1187 MobiDBLite consensus disorder prediction 674 708 - -
Tsu07g02174 1187 SMART set_7 1048 1171 IPR001214 GO:0005515
Tsu07g02174 1187 MobiDBLite consensus disorder prediction 999 1017 - -
Tsu07g02174 1187 MobiDBLite consensus disorder prediction 885 960 - -
Tsu07g02174 1187 MobiDBLite consensus disorder prediction 921 950 - -
Tsu07g02174 1187 ProSiteProfiles Post-SET domain profile. 1171 1187 IPR003616 -
Tsu07g02174 1187 CDD SET_SETD1 1036 1183 - -
Tsu07g02174 1187 Gene3D - 177 254 IPR035445 -
Tsu07g02174 1187 MobiDBLite consensus disorder prediction 984 1017 - -
Tsu07g02174 1187 MobiDBLite consensus disorder prediction 783 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02174 Tsu-Chr7 23992206 23999310 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02174 1047 1187 C2H2 Transcription Factor Family AT2G23740 35.583 3.68e-18 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu07g02174 SET 1.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02174 - - cam:101514300 1818.9