Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02154 ATGGCGCCCAGTCTGAAAAACTTACAGCTAACTACTCAATCAGCCGGCCGGAAAATTGCTTCCACCGATGATGACATGGTAAACGTCCGGCTACTAGACTCCGATGATAGAATTGACGATGAGATTAGAAGAATTCAGATAAGAGTCTCTGGCATGACATGCACCGCTTGCtcaaattcaattgaatcagCTCTTAAAGCCATTGATGGTGTTGTTACTGTTTCTGTTGCTTTACTGCAGAATAAAGCTGATGTTGTTTTCAACTCTGCTCTGATCAagGACGAAGACATTAAAAATGCAATTGAAGATGCAGGGTTCGAAGCAGACATATTACCTGAATCTAGTGGACAGGGAAAGATTCCAGATGAAACCCTGGTTGGACAGTTCACTATTGGAGGTATGACATGTGCAGCCTGTGTAAATTCTGTTGAAGGTATTTTGAGAGATCTTCCGGGGGTTAAAAGGGCTGTGGTAGCTTTGGCCACTTCATTGGGCGAAGTTGAATATGATCCAAGTGTAATTAGTAAAGATGATATAGTCAATGCAATTGAAGATTCTGGCTTTGAAGCCTCTTTTGTACAGAGCAACGAGCaggataaaattatttttggagTTGCTGGCGTGTACAATGTAATAGATGCACAAGTTTTAGAAGACATGCTCAGTAACATGAAAGGAGTAAGGCAGTTTCGTTTTGACCAGATATCGGGTGAATTAGATGTTCTGTTTGATCCTCAAGTTCTCAGTCCTAGGTCCTTGGTTGATGGGTTCCATGGGGAAAGCAATGGAAAGTTTGAGCTACGTGTTAGAAGCCCTTATACAAGGATGGCTTCTAAAGATGTTGAAGAGACCTCAACTATATTTCGGCTTTTTATCTCCAGCCTGTGTCTTAGTGTTCCTCTCTTCTTTATGAAGGTAGTTTGTCCTCATATTCCATTTATGTATTCCTTGTTACTTTGGCGATGTGGGCCTTTTCTCATGGGTGATTGGGTGAAATGGGCATTGGTGAGTGTCATCCAATTTGGGATTGGGAAACGCTTTTATATTGCAGCTGCCAGGGCTCTTAGAAATGGTTCAACAAACATGGATGTTCTGATTGCGGTGGGAACTACCGCCTCTTACGTTTATTCTGTTTATGCTCTTCTATATGGCGCTCTTACTGGATTTTGGTCCCCAACTTACTTTGAAACAAGTGCTATGCTTATAACATTTGTTTTGTTGGGGAAGTATTTGGAAGTCCTTGCTAAGGGAAAGACATCTGAtgccataaaaaaattagtagaaCTTGCTCCTGCAACAGCTTTATTGATCATTAATGATAAAGATGGTAAATCTATTGAAGAAAGGGAAATTGATTCTTTGCTCGTTCAATCGGGTGACACATTGAAAGTTCTTCCTGGTACGAAGATTCCTGCTGATGGCATTGTTACTTGGGGCTCAAGTTATGTAAATGAAAGCATGGTCACTGGTGAGTCTGTACCTGTTTTGAAGGAGGTGAATGCTTCAGTTATTGGGGGTACAATAAATTTGCATGGCGTACTTCACATTAAAGCTACCAAAATAGGATCTGATACAGTTTTGAGTCAGATAATAAGTTTGGTTGAAACAGCACAAATGTCCAAAGCTCCTATTCAGAAGTTTGCTGATTATGTAGCAAGCATATTTGTTCCGACTGTTATTTCTTTGGCATTATTGACATTTTTGAGTTGGTATATTGCTGGATCTATTGGAGCTTACCCAGAAGAATGGCTTCCAGAAAATGGAACTCACTTTGTATTTGCCCTAATGTTCTCAATATCTGTAGTGGTGATTGCGTGTCCTTGTGCACTTGGTTTGGCAACACCGACAGCTGTCATGGTGGCAACAGGGGTTGGAGCAAACAATGGAGTATTAATTAAAGGAGGAGATGCTTTGGAAACGGCTCAGATGGTGAAGTATGTGATATTTGATAAAACAGGCACTCTAACTCAGGGAAAAGCCAGTGTTACTGCAGCTACAGTATTCACGGGAATGCAACGTGGGGAATTTCTTAGATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCATTGGCCAAAGCAGTATTAGCATATGCACGCCACTTTCATTTCTTTGATGATTCTTCAGCTACTACAGAGAATGATGCAAAGTCTGGGTGGCTTTATGATGTTTCAGACTTCTCTGCTCTTCCAGGAAGAGGTGTTCAATGCTTTATAAACGGACGGCGTATTTTGGTTGGCAACAGGAATTTGATGATGGAAAGTGGCATAGATATTTCAACAGAAGTGGAAAATTTTGTGGTTGAGCTGGAACAAACTGCACAGACAGGGATACTAGTATCATATGATGATATATTAATCGGAGCTTTGGGGGTTGCAGACCCATTAAAGAGAGAAGCACCTGTGGTTATAGAGATCCTCCAAAAAATGGGTGTCATACCTGTTATGGTTACAGGAGATAACTGGCGAACAGCTCGTGCTGTTGCCAAGGAGGTTGGAATCGAAGATGTGAGAGCAGAGGTGATGCCTGCGGGAAAAGCCGAAATTGTCCGTTCATTCCAAAAGGATGGAAGCATAGTCGCAATGGTAGGCGATGGCATCAATGATTCTCCGGCATTAGCAGCTGCTGATGTTGGCATGGCAATTGGAGCTGGAACCGATATTGCAATAGAAGCTGCTAACTTTGTTTTGATGAGAAATAACTTGGAAGATGTGATCACAGCAATCCATCTTTCTCGGAAGACGTTCTCTCGTATTAGATTGAATTACATATTTGCAATGGGTTACAATGTTGTTGCTATACCAGTTGCGGCTGGagttttatatccttcattaGGGATCAAGCTGCCACCATGGGTTTCCGGTGCATGCATGGCTCTCTCTTCTGTAAGTGTTGTATGCTCTTCGTTGCTTCTTAAAAGATATAGAAAACCGAAACTTACCACAGTCCTTGAAATAATTGTAGAATAA 2970 0.4088 MAPSLKNLQLTTQSAGRKIASTDDDMVNVRLLDSDDRIDDEIRRIQIRVSGMTCTACSNSIESALKAIDGVVTVSVALLQNKADVVFNSALIKDEDIKNAIEDAGFEADILPESSGQGKIPDETLVGQFTIGGMTCAACVNSVEGILRDLPGVKRAVVALATSLGEVEYDPSVISKDDIVNAIEDSGFEASFVQSNEQDKIIFGVAGVYNVIDAQVLEDMLSNMKGVRQFRFDQISGELDVLFDPQVLSPRSLVDGFHGESNGKFELRVRSPYTRMASKDVEETSTIFRLFISSLCLSVPLFFMKVVCPHIPFMYSLLLWRCGPFLMGDWVKWALVSVIQFGIGKRFYIAAARALRNGSTNMDVLIAVGTTASYVYSVYALLYGALTGFWSPTYFETSAMLITFVLLGKYLEVLAKGKTSDAIKKLVELAPATALLIINDKDGKSIEEREIDSLLVQSGDTLKVLPGTKIPADGIVTWGSSYVNESMVTGESVPVLKEVNASVIGGTINLHGVLHIKATKIGSDTVLSQIISLVETAQMSKAPIQKFADYVASIFVPTVISLALLTFLSWYIAGSIGAYPEEWLPENGTHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALETAQMVKYVIFDKTGTLTQGKASVTAATVFTGMQRGEFLRLVASAEASSEHPLAKAVLAYARHFHFFDDSSATTENDAKSGWLYDVSDFSALPGRGVQCFINGRRILVGNRNLMMESGIDISTEVENFVVELEQTAQTGILVSYDDILIGALGVADPLKREAPVVIEILQKMGVIPVMVTGDNWRTARAVAKEVGIEDVRAEVMPAGKAEIVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAANFVLMRNNLEDVITAIHLSRKTFSRIRLNYIFAMGYNVVAIPVAAGVLYPSLGIKLPPWVSGACMALSSVSVVCSSLLLKRYRKPKLTTVLEIIVE 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02154 989 ProSitePatterns Heavy-metal-associated domain. 49 79 IPR017969 GO:0046872
Tsu07g02154 989 SUPERFAMILY HMA, heavy metal-associated domain 39 112 IPR036163 GO:0046872
Tsu07g02154 989 Pfam E1-E2 ATPase 429 627 - -
Tsu07g02154 989 CDD P-type_ATPase_Cu-like 289 959 - -
Tsu07g02154 989 Gene3D - 639 913 IPR023214 -
Tsu07g02154 989 TIGRFAM TIGR00003: copper ion binding protein 45 108 IPR006122 GO:0005507
Tsu07g02154 989 TIGRFAM TIGR00003: copper ion binding protein 128 190 IPR006122 GO:0005507
Tsu07g02154 989 SUPERFAMILY Calcium ATPase, transduction domain A 448 534 IPR008250 -
Tsu07g02154 989 PANTHER HEAVY METAL P-TYPE ATPASE 18 982 - -
Tsu07g02154 989 Gene3D - 127 192 - -
Tsu07g02154 989 Pfam haloacid dehalogenase-like hydrolase 644 877 - -
Tsu07g02154 989 Gene3D - 659 796 IPR023299 GO:0000166
Tsu07g02154 989 Pfam Heavy-metal-associated domain 47 107 IPR006121 GO:0046872
Tsu07g02154 989 Pfam Heavy-metal-associated domain 129 189 IPR006121 GO:0046872
Tsu07g02154 989 CDD HMA 128 191 IPR006121 GO:0046872
Tsu07g02154 989 SUPERFAMILY Calcium ATPase, transmembrane domain M 386 937 IPR023298 -
Tsu07g02154 989 Gene3D - 416 538 - -
Tsu07g02154 989 CDD HMA 46 108 IPR006121 GO:0046872
Tsu07g02154 989 ProSiteProfiles Heavy-metal-associated domain profile. 44 110 IPR006121 GO:0046872
Tsu07g02154 989 PANTHER ATP7, ISOFORM B 18 982 - -
Tsu07g02154 989 PRINTS P-type cation-transporting ATPase superfamily signature 484 498 - -
Tsu07g02154 989 PRINTS P-type cation-transporting ATPase superfamily signature 863 882 - -
Tsu07g02154 989 PRINTS P-type cation-transporting ATPase superfamily signature 648 662 - -
Tsu07g02154 989 PRINTS P-type cation-transporting ATPase superfamily signature 788 799 - -
Tsu07g02154 989 PRINTS P-type cation-transporting ATPase superfamily signature 810 820 - -
Tsu07g02154 989 PRINTS P-type cation-transporting ATPase superfamily signature 886 898 - -
Tsu07g02154 989 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 733 943 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g02154 989 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 401 675 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g02154 989 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 362 972 IPR027256 GO:0006812|GO:0016021|GO:0019829
Tsu07g02154 989 SFLD p-type atpase 630 915 IPR044492 -
Tsu07g02154 989 ProSitePatterns Heavy-metal-associated domain. 131 160 IPR017969 GO:0046872
Tsu07g02154 989 Gene3D - 42 113 - -
Tsu07g02154 989 ProSiteProfiles Heavy-metal-associated domain profile. 126 192 IPR006121 GO:0046872
Tsu07g02154 989 SUPERFAMILY HMA, heavy metal-associated domain 122 197 IPR036163 GO:0046872
Tsu07g02154 989 PRINTS H+-transporting ATPase (proton pump) signature 835 851 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g02154 989 PRINTS H+-transporting ATPase (proton pump) signature 894 919 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g02154 989 PRINTS H+-transporting ATPase (proton pump) signature 863 879 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g02154 989 ProSitePatterns E1-E2 ATPases phosphorylation site. 650 656 IPR018303 -
Tsu07g02154 989 SFLD Haloacid Dehalogenase 630 915 - -
Tsu07g02154 989 SUPERFAMILY HAD-like 647 969 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02154 Tsu-Chr7 23823355 23829630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02154 1 989 Primary Pumps ATPases AT5G44790 72.520 0.0 1472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02154 K17686 - gmx:100804960 1645.56