Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02127 atggcttcttcttcttcttttccacTTCACCAATCAACACCACCATGTTTCTTCTCAAAAACCCCAACATTTTTTACTAATGCTAGTTTAATTCCTATACAGTTTAAAGGTTTGCGCCATGGCTATTTATGGAGACCCACTTACTCTTTTGCCACTTTTGTTGAACACAAAGTACAGCCTGTTAAAGCAGTTTCTGTTGAAGCTGCTCAATTTCCCTTGCTTCAGCCTCCTGAGCCTGATAATTCACCTCCTGAGTTGGAGCCTGTGGATCCTGATTTCTACAGGATAGGATATGTCCGAAGCATGCGAGCTTATGGAGTTGATTTTAAGGAAGGGCCAAATGGTTTTGGTGTGTATGCTTCTAAAGATGTCGAAGCTCTTCGTCGACCAAGGGTTATAATGGAAATTCCTCTTGAATTGATGCTAACCATAAGCAAGAAGCTCCCGTGGATGTTTTTTCCCGATATAATTCCCCTTGGTCATCCAATATTTGATATTATCAACTCAACAGATCCAGAGACAGATTGGGATTTAAGATTAGCATGCCTTCTCTTGTTCTCGTTTGACTGCAAAGACAACTTTTGGCAGTATTACAGTGATTTCTTACCAAGTGAAGATGAAAGTACTAGCTTACTTCTAGCTACAGAGGAGGAACTTTTGGAGCTGCAGGATCCTGATCTTGCTTCTAAAGTGAGATTTCAGCAACAAAGAGCCTTAGAATTCTGGAAGAAGAATTGGCATAGTGATGTGCCCCTAAAAGTAAAACGTCTTGCTCGTGAACCACAAAGGTTTATTTGGGCAGTAGGAATTGCACAGTCACGATGTATCAATATGCAAATGAGAATGTGTGCACTAACTCAACAGGCAAATATGCTGATTCCTTATGCCGATATGTTGAACCATTCATTTGAgccaaattgttttttccatTGGCGTTTTAAGGACAGGATGCTTGAGGTTCTTACAAATGCTGGACAACGGATTAGAAAGGGAGATGAGATGACAGTTGATTACATGAGTGCACAGAAGAATGACATGTTAATGCTAAGATATGGATTCTCATCGCCAGTGGTAACTTTCTTTTTCTCCTAA 1092 0.3883 MASSSSFPLHQSTPPCFFSKTPTFFTNASLIPIQFKGLRHGYLWRPTYSFATFVEHKVQPVKAVSVEAAQFPLLQPPEPDNSPPELEPVDPDFYRIGYVRSMRAYGVDFKEGPNGFGVYASKDVEALRRPRVIMEIPLELMLTISKKLPWMFFPDIIPLGHPIFDIINSTDPETDWDLRLACLLLFSFDCKDNFWQYYSDFLPSEDESTSLLLATEEELLELQDPDLASKVRFQQQRALEFWKKNWHSDVPLKVKRLAREPQRFIWAVGIAQSRCINMQMRMCALTQQANMLIPYADMLNHSFEPNCFFHWRFKDRMLEVLTNAGQRIRKGDEMTVDYMSAQKNDMLMLRYGFSSPVVTFFFS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02127 363 CDD SET_LSMT 106 353 - -
Tsu07g02127 363 ProSiteProfiles SET domain profile. 94 339 IPR001214 GO:0005515
Tsu07g02127 363 Pfam SET domain 115 338 IPR001214 GO:0005515
Tsu07g02127 363 Gene3D set domain protein methyltransferase, domain 1 99 353 - -
Tsu07g02127 363 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 67 357 - -
Tsu07g02127 363 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 14 67 357 - -
Tsu07g02127 363 SUPERFAMILY SET domain 114 354 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tsu07g02127 SET 3.2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02127 - - cam:101505820 572.778