Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02125 ATGGCATTTGTTATTGCATCATACAAATATGTTgaaattcattcattccttAATGTGAACCAGACATATGATGCcgatgatgatgacgacgacGACGATAGTGACAATGGtgattataatgatgatgaggaagaccataacaacaacaacaaaaatgtgcAAATTTTTCAAGAAGTTTGTATTGATCCTGTGGTAGCATATGTTGTGTATGCTCCAATCAGTATAAGAAATATGCGTAAGATCTTAAATGAAGAGAACTCATCAGATTTTGGAATTCTTCCTTGgggtttcatgatatcaagagATGGAAATTTTGATGCTGATGATACATATGGAAGTGATCACCATAGACAAAAAGGATCGCtgttaacattttcttttcGAGTTTTAGTTCCTGCTGAAGCACCATTAGGAGTAACACTGCAAAATTTAACTTCAATATTCACCACAACAATTGAAAAGATTCAGAATGCTTTGGATTGTGAAGATGATGATTAA 498 0.255 MAFVIASYKYVEIHSFLNVNQTYDADDDDDDDDSDNGDYNDDEEDHNNNNKNVQIFQEVCIDPVVAYVVYAPISIRNMRKILNEENSSDFGILPWGFMISRDGNFDADDTYGSDHHRQKGSLLTFSFRVLVPAEAPLGVTLQNLTSIFTTTIEKIQNALDCEDDD 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02125 165 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 50 160 - -
Tsu07g02125 165 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 50 160 IPR042160 -
Tsu07g02125 165 MobiDBLite consensus disorder prediction 23 42 - -
Tsu07g02125 165 MobiDBLite consensus disorder prediction 22 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02125 Tsu-Chr7 23423721 23424218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02125 47 162 Homeobox Transcription Factor Family AT1G05230 34.167 3.76e-15 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02125 K09338 - aprc:113852280 86.2705