Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02115 atgaaaatattaacaCTTTTTCTCTTGTGCTTCTTCTCTTCAATTCTATTAGTCTTTTgcaatgaaaatgaaataagcacTTTGAAAGTGCTTTTAGAAGTGAAATCTTCTTTTGTGAATGACCCTGAAAATGTTCTCATTGATTGGTCACAAAACAACACTGATTATTGTACTTGGAGAGGCATTTCATGTGACTCGGTTAATGTTGTGGTTGGACTCAACCTTTCCTACTCGTCACTCACTGGGTCAATTTCACCATCAATCGGTCTTTTACAAAACCTACTTCACCTTGATCTTTCATCTAACCATCTCGTGGGTCCCATTCCACCTTCTATTTCTAACCTCACTAAATTAGAATCTTTGCTTCTCTTTTCCAACCAACTCACTAACCATATTCCAAACGAGTTAGGCTCGTTACTGAGTCTCCGTGTTTTACGACTCGGTGATAATGAACTCAGTGGCGAAATTCCTTCTTCATTAGGCAATTTGGTCAACCTTGTCAGCCTTGGTTTAGCTTCAAGCAAACTCACCGGAAACTGTTCAAGCCTTGTAATCTTCTCTGCAGCTGACAACAAACTCAATGGAACAATCCCAACTCAACTGAGTCAACTCAAAAACCTCCAAGTTCTCAACTTTGCCAACAATACCTTAACAGGGGAAATTCCGAGTCAACTCGGTCAAATGAACCAGCTTAATTATCTCAATTTAATGGAAAACAAATTCATGGGTCACATTCCACCATCTTTATCTCGATTGGGTAACCTTCAAAATCTTGACTTGTCATTGAACAAATTCAATGGAGGAATTCCAAAAGAATTTACAAACATGCATCAGTTGAAATACTTAGTTCTTTCTGGAAACCCTTTACATGGAACAATTCCACCAACTTTATGTTCCAATGCAACAAATTTGGAACATTTAATGATATCTATGAGTGAACTTTATGGTGAAATTCCATCTGAATTGAGTCAATGTAAATCATTGAAGCAAATTGATTTATCAAACAATTCTCTCAATGGAACAATACCACTTGAGATTTATAGTTTGATGAATTTAACTGATCTTATGCTTCATAACAATAGTTTAATTGGTTCAATTTCACCTAACATAGGTAATTTAACCAACATGCAAACACTTGCATTGTATCATAATAAGTTACAAGGTGTTTTACCTAAAGAAATTGGAAGGCTTGGAAAGTTGGAAATTTTGTATCTTTATGATAATCAATTTTCTGGTGAGATACCTTGGGAAATTGGTAATTGTTCAAGATTACAAATGGTTGATTTATTTGGTAACCATTTTGGTGGAAGAATTCCAATTAGTATTGGAAGGTTAAAAGATTTGAATTTTCTTCATCTTAGGCAAAATGAGTTTGTTGGTGAAATTCCAGCTACACTTGGGAATTGTCATAAGCTGAATGTTCTTGATTTGGCAGATAATAAGCTCTCTGGTGGAATTCCTGCAACATTTGGTTATCTTAAAGATTTGAAGTTGTTTATGCTTTACAATAATTCTCTTGAAGGTGGTATTCCTCAACAAATGGTGAATGTAGGAAACTTGACAAGAGTTAATCTTTCGAAGAATAAGTTGAATGGAAGTTTGATTCCATTGTGTAGCTCTAGAgagtttctttcttttgatgTTACAGGTAATGAATTTGATGGTGAAATTCCTTCAAATTTGGGGAACTCTTTGTCTCTTGATAGGTTAAGATTAGGAGGTAACAAATTTTCCGGTGAAATTCCGAGGACATTTGGAAAAATCGCTGATTTGTCATTGTTAGATCTTTCAGGAAATTCACTCATAGGACCAATACCAGGTGAACTATCTTTGTGTAGTAAACTAGCTTCTGTTGATTTAAGCAATAATCTTCTTTTTGGTCATATACCATCATGGCTTGGAAATTTACCTAAGTTAGGAAAACTTAATCTCGCTTTTAATCAATTTTCTGGTCCTTTTCCACTAAGATTATTCAAATTACCTATGTTGTTGGTTCTTTCCTTGAATAACAATTCTCTTAATGGTAGTCTGCCAAATGGTATCGGCGATCTTGAATCGCTTAATGTCCTAAGACTTGACCATAATAATTTTAGTGGACCAATCCCTCATGAAATAGGTAAGTTGAGAAATCTTTATGAGCTTAATCTCTCTAGAAATGTCTTCAGTGGTGACATACCGAATGAGATCGGAAATCTTCAAAATCTTCAAGTTGTTTTAGACCTCAGTTACAATAATCTCTCTGGTCAGGTTCCATCTTCTATTGGCACATTGGCGAAATTGGAAGCACTTGATCTATCTCACAATCAACTCACCGGTGTAGTTCCTTCAAACATTGGCGAAATGATTAGCTTGGAAAAGCTTAACATCTCTTATAATAGCTTTCAAGGTGCATTGGATAAGAAGTTTTCTCGCTGGCCATACGATGCGTTTGTAGGGAACCTTCGTCTTTGTGGAGCCTCTCTTGGTAGCTGCAACCACAGTGGAGCTTCCCGAAATAAGCTATCACGGTTAAGTGAGACATCAGTTATCATAATCTCTGCCATTTCAACTCTAGCTGCAATTGCACTACTTATTCTTGCAGTAAAAATCTTCTTGAGACATAGGCaagattttttgaagaaagACAATGAATTGGCATGTGTTTTCTCCTCCTCTTCGTCAAAAGCGCAGAAACGGCCATTGTTCCCTTTAAGTACAGGTGGACGACGAGAATTCAGGTGGGAAGACATCATGGAAGCTACAAACCATTTGAGCGATGAATTCATAATCGGCTCTGGAGGTTCCGGAACAGTCTACAGAGTTGAATTACCTACCGGCGAAACCGTAGCTGCCAAGAGAATATCATTGAAAGATGAATATCTTTTACACAAAAGCTTTATAAGAGAAGTGAAAACATTAGGGAGAATTAAACATAGACATTTGGTGAAACTGATTGGTTGTTgtagcaatagaaacaaagGAAATGGTTGTAACTTATTGATATATGAGTATATGGAGAATGGAAGTGTGTGGGATTGGTTACATGGAAATGCTCTAAAGTTAAAGAAAAACCTTGATTGGGAAACAAGGTTCAAAATTGCTTTAGGGTTAGCTCAAGGAATGGAGTACCTTCATCATGATTGTGTGCCAAAGATCATTCATAGGGACATCAAATCTAGCAACATATTGTTAGATTCTAATATGGATGCACATTTGGGAGATTTTGGATTGGCAAAAGCTATCATTGAAAGTCATGATTCTAATACTGAGTCTACTTCTTGTTTTGCAGGATCTTATGGTTACATAGCTCCAGAGTTTGGATACTCTCTAAAATCAACAGAGAAAAGTGATGTTTACAGCATGGGAATTGTGCTTATGGAACTTGTTAGTGGTAAATTACCAACTGATGCATTATTTAGAGGAGGTATAGACATTGTGAGATGGGTGGAGATGCATATTGATAAGAAAGGAACTGAAAATGAAGAACTTATTGATCCTGAGCTCAAACCACTTTTACCTTGTGAAGAATTTGCTGCATTTCAAGTTCTTGAGATAGCTTTACAATGCACTAAAACTGCACCACAAGAGAGGCCATCATCAAGACAAGTTTGTGATCTTCTTCTACATGTGTCCAAGAACAAAAAAGTTGAGTTTAAGAAGATGAATTTGGATTCCTAG 3657 0.3558 MKILTLFLLCFFSSILLVFCNENEISTLKVLLEVKSSFVNDPENVLIDWSQNNTDYCTWRGISCDSVNVVVGLNLSYSSLTGSISPSIGLLQNLLHLDLSSNHLVGPIPPSISNLTKLESLLLFSNQLTNHIPNELGSLLSLRVLRLGDNELSGEIPSSLGNLVNLVSLGLASSKLTGNCSSLVIFSAADNKLNGTIPTQLSQLKNLQVLNFANNTLTGEIPSQLGQMNQLNYLNLMENKFMGHIPPSLSRLGNLQNLDLSLNKFNGGIPKEFTNMHQLKYLVLSGNPLHGTIPPTLCSNATNLEHLMISMSELYGEIPSELSQCKSLKQIDLSNNSLNGTIPLEIYSLMNLTDLMLHNNSLIGSISPNIGNLTNMQTLALYHNKLQGVLPKEIGRLGKLEILYLYDNQFSGEIPWEIGNCSRLQMVDLFGNHFGGRIPISIGRLKDLNFLHLRQNEFVGEIPATLGNCHKLNVLDLADNKLSGGIPATFGYLKDLKLFMLYNNSLEGGIPQQMVNVGNLTRVNLSKNKLNGSLIPLCSSREFLSFDVTGNEFDGEIPSNLGNSLSLDRLRLGGNKFSGEIPRTFGKIADLSLLDLSGNSLIGPIPGELSLCSKLASVDLSNNLLFGHIPSWLGNLPKLGKLNLAFNQFSGPFPLRLFKLPMLLVLSLNNNSLNGSLPNGIGDLESLNVLRLDHNNFSGPIPHEIGKLRNLYELNLSRNVFSGDIPNEIGNLQNLQVVLDLSYNNLSGQVPSSIGTLAKLEALDLSHNQLTGVVPSNIGEMISLEKLNISYNSFQGALDKKFSRWPYDAFVGNLRLCGASLGSCNHSGASRNKLSRLSETSVIIISAISTLAAIALLILAVKIFLRHRQDFLKKDNELACVFSSSSSKAQKRPLFPLSTGGRREFRWEDIMEATNHLSDEFIIGSGGSGTVYRVELPTGETVAAKRISLKDEYLLHKSFIREVKTLGRIKHRHLVKLIGCCSNRNKGNGCNLLIYEYMENGSVWDWLHGNALKLKKNLDWETRFKIALGLAQGMEYLHHDCVPKIIHRDIKSSNILLDSNMDAHLGDFGLAKAIIESHDSNTESTSCFAGSYGYIAPEFGYSLKSTEKSDVYSMGIVLMELVSGKLPTDALFRGGIDIVRWVEMHIDKKGTENEELIDPELKPLLPCEEFAAFQVLEIALQCTKTAPQERPSSRQVCDLLLHVSKNKKVEFKKMNLDS 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02115 1218 Gene3D Ribonuclease Inhibitor 344 438 IPR032675 -
Tsu07g02115 1218 ProSiteProfiles Protein kinase domain profile. 917 1205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02115 1218 SMART LRR_typ_2 660 684 IPR003591 -
Tsu07g02115 1218 SMART LRR_typ_2 397 421 IPR003591 -
Tsu07g02115 1218 SMART LRR_typ_2 139 163 IPR003591 -
Tsu07g02115 1218 SMART LRR_typ_2 708 732 IPR003591 -
Tsu07g02115 1218 SMART LRR_typ_2 252 275 IPR003591 -
Tsu07g02115 1218 SMART LRR_typ_2 757 781 IPR003591 -
Tsu07g02115 1218 SMART LRR_typ_2 276 300 IPR003591 -
Tsu07g02115 1218 SMART LRR_typ_2 204 228 IPR003591 -
Tsu07g02115 1218 SMART LRR_typ_2 91 114 IPR003591 -
Tsu07g02115 1218 SMART LRR_typ_2 373 396 IPR003591 -
Tsu07g02115 1218 SMART LRR_typ_2 445 469 IPR003591 -
Tsu07g02115 1218 SMART LRR_typ_2 115 138 IPR003591 -
Tsu07g02115 1218 SUPERFAMILY L domain-like 179 540 - -
Tsu07g02115 1218 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 178 - -
Tsu07g02115 1218 Gene3D Transferase(Phosphotransferase) domain 1 998 1217 - -
Tsu07g02115 1218 Gene3D Ribonuclease Inhibitor 183 246 IPR032675 -
Tsu07g02115 1218 Pfam Leucine rich repeat 738 793 IPR001611 GO:0005515
Tsu07g02115 1218 Pfam Leucine rich repeat 351 410 IPR001611 GO:0005515
Tsu07g02115 1218 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 3 178 - -
Tsu07g02115 1218 SUPERFAMILY Protein kinase-like (PK-like) 894 1200 IPR011009 -
Tsu07g02115 1218 Gene3D Phosphorylase Kinase; domain 1 879 997 - -
Tsu07g02115 1218 PRINTS Leucine-rich repeat signature 328 341 - -
Tsu07g02115 1218 PRINTS Leucine-rich repeat signature 757 770 - -
Tsu07g02115 1218 SUPERFAMILY L domain-like 540 806 - -
Tsu07g02115 1218 SMART serkin_6 917 1205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02115 1218 ProSitePatterns Protein kinases ATP-binding region signature. 923 945 IPR017441 GO:0005524
Tsu07g02115 1218 Pfam Protein kinase domain 922 1197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g02115 1218 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 178 1215 - -
Tsu07g02115 1218 Gene3D Ribonuclease Inhibitor 26 182 IPR032675 -
Tsu07g02115 1218 Gene3D Ribonuclease Inhibitor 247 343 IPR032675 -
Tsu07g02115 1218 Gene3D Ribonuclease Inhibitor 439 538 IPR032675 -
Tsu07g02115 1218 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 178 1215 - -
Tsu07g02115 1218 SUPERFAMILY L domain-like 51 246 - -
Tsu07g02115 1218 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1045 1057 IPR008271 GO:0004672|GO:0006468
Tsu07g02115 1218 Pfam Leucine Rich Repeat 93 115 IPR001611 GO:0005515
Tsu07g02115 1218 Gene3D Ribonuclease Inhibitor 539 832 IPR032675 -
Tsu07g02115 1218 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02115 Tsu-Chr7 23235176 23239466 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02115 638 804 Receptor kinase-like Gene Family AT5G56040 31.019 3.81e-18 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu07g02115 Pkinase 6.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02115 - - mtr:MTR_2g437730 1736.85